Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HCFC2Q9Y5Z7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
HCFC2Q9Y5Z7 MIR935-201ENST00000401179 91 ntBASIC25.53■■□□□ 1.68
HCFC2Q9Y5Z7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.53■■□□□ 1.68
HCFC2Q9Y5Z7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
HCFC2Q9Y5Z7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HCFC2Q9Y5Z7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
HCFC2Q9Y5Z7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HCFC2Q9Y5Z7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HCFC2Q9Y5Z7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
HCFC2Q9Y5Z7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.5■■□□□ 1.67
HCFC2Q9Y5Z7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
HCFC2Q9Y5Z7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.5■■□□□ 1.67
HCFC2Q9Y5Z7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.5■■□□□ 1.67
HCFC2Q9Y5Z7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
HCFC2Q9Y5Z7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
HCFC2Q9Y5Z7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HCFC2Q9Y5Z7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.49■■□□□ 1.67
HCFC2Q9Y5Z7 AC137630.3-201ENST00000607245 391 ntBASIC25.49■■□□□ 1.67
HCFC2Q9Y5Z7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.49■■□□□ 1.67
HCFC2Q9Y5Z7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HCFC2Q9Y5Z7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HCFC2Q9Y5Z7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.48■■□□□ 1.67
HCFC2Q9Y5Z7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.48■■□□□ 1.67
HCFC2Q9Y5Z7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HCFC2Q9Y5Z7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 TSPY9P-201ENST00000440215 945 ntBASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 TSPY11P-201ENST00000442607 1045 ntBASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HCFC2Q9Y5Z7 AC021242.3-201ENST00000607598 1377 ntBASIC25.46■■□□□ 1.67
HCFC2Q9Y5Z7 DRD5P2-201ENST00000421395 2012 ntBASIC25.46■■□□□ 1.67
HCFC2Q9Y5Z7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.46■■□□□ 1.67
HCFC2Q9Y5Z7 AC120024.1-201ENST00000562672 995 ntBASIC25.46■■□□□ 1.67
HCFC2Q9Y5Z7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.46■■□□□ 1.67
HCFC2Q9Y5Z7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
HCFC2Q9Y5Z7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
HCFC2Q9Y5Z7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
HCFC2Q9Y5Z7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
HCFC2Q9Y5Z7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
HCFC2Q9Y5Z7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
HCFC2Q9Y5Z7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HCFC2Q9Y5Z7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HCFC2Q9Y5Z7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HCFC2Q9Y5Z7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HCFC2Q9Y5Z7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HCFC2Q9Y5Z7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HCFC2Q9Y5Z7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HCFC2Q9Y5Z7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.43■■□□□ 1.66
HCFC2Q9Y5Z7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HCFC2Q9Y5Z7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.42■■□□□ 1.66
HCFC2Q9Y5Z7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.42■■□□□ 1.66
HCFC2Q9Y5Z7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
HCFC2Q9Y5Z7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HCFC2Q9Y5Z7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HCFC2Q9Y5Z7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.41■■□□□ 1.66
HCFC2Q9Y5Z7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
HCFC2Q9Y5Z7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HCFC2Q9Y5Z7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
HCFC2Q9Y5Z7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 MIR638-201ENST00000385237 100 ntBASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 BX255925.1-201ENST00000566954 1854 ntBASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HCFC2Q9Y5Z7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.39■■□□□ 1.66
HCFC2Q9Y5Z7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.39■■□□□ 1.66
HCFC2Q9Y5Z7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HCFC2Q9Y5Z7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.39■■□□□ 1.66
HCFC2Q9Y5Z7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.39■■□□□ 1.66
HCFC2Q9Y5Z7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HCFC2Q9Y5Z7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HCFC2Q9Y5Z7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.38■■□□□ 1.65
HCFC2Q9Y5Z7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
HCFC2Q9Y5Z7 LINC01003-201ENST00000564834 1764 ntBASIC25.38■■□□□ 1.65
HCFC2Q9Y5Z7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 AC092028.1-203ENST00000608262 953 ntBASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms