Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC37.13■■■■□ 3.54
CDC42BPBQ9Y5S2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.54
CDC42BPBQ9Y5S2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC37.13■■■■□ 3.53
CDC42BPBQ9Y5S2 AC137630.3-201ENST00000607245 391 ntBASIC37.13■■■■□ 3.53
CDC42BPBQ9Y5S2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CDC42BPBQ9Y5S2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
CDC42BPBQ9Y5S2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC37.11■■■■□ 3.53
CDC42BPBQ9Y5S2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
CDC42BPBQ9Y5S2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
CDC42BPBQ9Y5S2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC37.1■■■■□ 3.53
CDC42BPBQ9Y5S2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC37.1■■■■□ 3.53
CDC42BPBQ9Y5S2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC37.1■■■■□ 3.53
CDC42BPBQ9Y5S2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
CDC42BPBQ9Y5S2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC37.09■■■■□ 3.53
CDC42BPBQ9Y5S2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC37.09■■■■□ 3.53
CDC42BPBQ9Y5S2 MIR4281-201ENST00000580852 62 ntBASIC37.09■■■■□ 3.53
CDC42BPBQ9Y5S2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC37.09■■■■□ 3.53
CDC42BPBQ9Y5S2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC37.09■■■■□ 3.53
CDC42BPBQ9Y5S2 MIR638-201ENST00000385237 100 ntBASIC37.08■■■■□ 3.53
CDC42BPBQ9Y5S2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC37.08■■■■□ 3.53
CDC42BPBQ9Y5S2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC37.08■■■■□ 3.53
CDC42BPBQ9Y5S2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CDC42BPBQ9Y5S2 AC021242.3-201ENST00000607598 1377 ntBASIC37.08■■■■□ 3.53
CDC42BPBQ9Y5S2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CDC42BPBQ9Y5S2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC37.07■■■■□ 3.52
CDC42BPBQ9Y5S2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC37.07■■■■□ 3.52
CDC42BPBQ9Y5S2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC37.07■■■■□ 3.52
CDC42BPBQ9Y5S2 KRT18P10-201ENST00000388836 1287 ntBASIC37.06■■■■□ 3.52
CDC42BPBQ9Y5S2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC37.06■■■■□ 3.52
CDC42BPBQ9Y5S2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC37.05■■■■□ 3.52
CDC42BPBQ9Y5S2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPBQ9Y5S2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPBQ9Y5S2 LINC01003-201ENST00000564834 1764 ntBASIC37.05■■■■□ 3.52
CDC42BPBQ9Y5S2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CDC42BPBQ9Y5S2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
CDC42BPBQ9Y5S2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC37.03■■■■□ 3.52
CDC42BPBQ9Y5S2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC37.03■■■■□ 3.52
CDC42BPBQ9Y5S2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CDC42BPBQ9Y5S2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC37.02■■■■□ 3.52
CDC42BPBQ9Y5S2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC37.02■■■■□ 3.52
CDC42BPBQ9Y5S2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC37.02■■■■□ 3.52
CDC42BPBQ9Y5S2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC37.02■■■■□ 3.52
CDC42BPBQ9Y5S2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC37.02■■■■□ 3.52
CDC42BPBQ9Y5S2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC37.01■■■■□ 3.52
CDC42BPBQ9Y5S2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
CDC42BPBQ9Y5S2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
CDC42BPBQ9Y5S2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC37■■■■□ 3.51
CDC42BPBQ9Y5S2 AC120024.1-201ENST00000562672 995 ntBASIC37■■■■□ 3.51
CDC42BPBQ9Y5S2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
CDC42BPBQ9Y5S2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC37■■■■□ 3.51
CDC42BPBQ9Y5S2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
CDC42BPBQ9Y5S2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 MIR935-201ENST00000401179 91 ntBASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC36.99■■■■□ 3.51
CDC42BPBQ9Y5S2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC36.97■■■■□ 3.51
CDC42BPBQ9Y5S2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC36.96■■■■□ 3.51
CDC42BPBQ9Y5S2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
CDC42BPBQ9Y5S2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC36.96■■■■□ 3.51
CDC42BPBQ9Y5S2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
CDC42BPBQ9Y5S2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
CDC42BPBQ9Y5S2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC36.96■■■■□ 3.51
CDC42BPBQ9Y5S2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC36.95■■■■□ 3.51
CDC42BPBQ9Y5S2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CDC42BPBQ9Y5S2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC36.94■■■■□ 3.5
CDC42BPBQ9Y5S2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC36.94■■■■□ 3.5
CDC42BPBQ9Y5S2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC36.94■■■■□ 3.5
CDC42BPBQ9Y5S2 AC142472.1-201ENST00000612013 1741 ntBASIC36.94■■■■□ 3.5
CDC42BPBQ9Y5S2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC36.93■■■■□ 3.5
CDC42BPBQ9Y5S2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
CDC42BPBQ9Y5S2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC36.93■■■■□ 3.5
CDC42BPBQ9Y5S2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC36.93■■■■□ 3.5
CDC42BPBQ9Y5S2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
CDC42BPBQ9Y5S2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC36.92■■■■□ 3.5
CDC42BPBQ9Y5S2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC36.92■■■■□ 3.5
CDC42BPBQ9Y5S2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC36.92■■■■□ 3.5
CDC42BPBQ9Y5S2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC36.92■■■■□ 3.5
CDC42BPBQ9Y5S2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
CDC42BPBQ9Y5S2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
CDC42BPBQ9Y5S2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
CDC42BPBQ9Y5S2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
CDC42BPBQ9Y5S2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC36.91■■■■□ 3.5
CDC42BPBQ9Y5S2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
CDC42BPBQ9Y5S2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 BX255925.1-201ENST00000566954 1854 ntBASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 TSPY9P-201ENST00000440215 945 ntBASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 TSPY11P-201ENST00000442607 1045 ntBASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
CDC42BPBQ9Y5S2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC36.89■■■■□ 3.5
CDC42BPBQ9Y5S2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC36.89■■■■□ 3.5
CDC42BPBQ9Y5S2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms