Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB6Q9Y5F9 WHAMMP3-201ENST00000611636 1609 ntBASIC22.54■■□□□ 1.2
PCDHGB6Q9Y5F9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHGB6Q9Y5F9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB6Q9Y5F9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHGB6Q9Y5F9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGB6Q9Y5F9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHGB6Q9Y5F9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB6Q9Y5F9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB6Q9Y5F9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGB6Q9Y5F9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGB6Q9Y5F9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHGB6Q9Y5F9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
PCDHGB6Q9Y5F9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB6Q9Y5F9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
PCDHGB6Q9Y5F9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.19
PCDHGB6Q9Y5F9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGB6Q9Y5F9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGB6Q9Y5F9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB6Q9Y5F9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGB6Q9Y5F9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB6Q9Y5F9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB6Q9Y5F9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB6Q9Y5F9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 AC074183.2-201ENST00000623112 922 ntBASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB6Q9Y5F9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB6Q9Y5F9 DUX4L9-201ENST00000449051 1259 ntBASIC22.49■■□□□ 1.19
PCDHGB6Q9Y5F9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHGB6Q9Y5F9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.49■■□□□ 1.19
PCDHGB6Q9Y5F9 AL359504.2-201ENST00000605506 1601 ntBASIC22.49■■□□□ 1.19
PCDHGB6Q9Y5F9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB6Q9Y5F9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 DUX4L18-201ENST00000553347 1267 ntBASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB6Q9Y5F9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB6Q9Y5F9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB6Q9Y5F9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGB6Q9Y5F9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHGB6Q9Y5F9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB6Q9Y5F9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB6Q9Y5F9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGB6Q9Y5F9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGB6Q9Y5F9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
PCDHGB6Q9Y5F9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 RARRES2P1-201ENST00000474487 481 ntBASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB6Q9Y5F9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGB6Q9Y5F9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
PCDHGB6Q9Y5F9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB6Q9Y5F9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB6Q9Y5F9 MIR6765-201ENST00000614092 87 ntBASIC22.44■■□□□ 1.18
PCDHGB6Q9Y5F9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB6Q9Y5F9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGB6Q9Y5F9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB6Q9Y5F9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB6Q9Y5F9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGB6Q9Y5F9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGB6Q9Y5F9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGB6Q9Y5F9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGB6Q9Y5F9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB6Q9Y5F9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 SPCS2P3-201ENST00000500401 656 ntBASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 AC018755.3-202ENST00000596210 929 ntBASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 AC142472.1-201ENST00000612013 1741 ntBASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGB6Q9Y5F9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms