Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB7Q9Y5E2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB7Q9Y5E2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB7Q9Y5E2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB7Q9Y5E2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB7Q9Y5E2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB7Q9Y5E2 AC142472.1-201ENST00000612013 1741 ntBASIC26.16■■□□□ 1.78
PCDHB7Q9Y5E2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PCDHB7Q9Y5E2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDHB7Q9Y5E2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHB7Q9Y5E2 KRT125P-201ENST00000546827 989 ntBASIC26.15■■□□□ 1.78
PCDHB7Q9Y5E2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB7Q9Y5E2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
PCDHB7Q9Y5E2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB7Q9Y5E2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 BX664725.1-201ENST00000438252 379 ntBASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB7Q9Y5E2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.12■■□□□ 1.77
PCDHB7Q9Y5E2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB7Q9Y5E2 KRT18P24-201ENST00000344739 1156 ntBASIC26.12■■□□□ 1.77
PCDHB7Q9Y5E2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB7Q9Y5E2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHB7Q9Y5E2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.11■■□□□ 1.77
PCDHB7Q9Y5E2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB7Q9Y5E2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB7Q9Y5E2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHB7Q9Y5E2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHB7Q9Y5E2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB7Q9Y5E2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB7Q9Y5E2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 MIR4787-201ENST00000607364 84 ntBASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDHB7Q9Y5E2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB7Q9Y5E2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
PCDHB7Q9Y5E2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
PCDHB7Q9Y5E2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
PCDHB7Q9Y5E2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB7Q9Y5E2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB7Q9Y5E2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PCDHB7Q9Y5E2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB7Q9Y5E2 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.08■■□□□ 1.77
PCDHB7Q9Y5E2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB7Q9Y5E2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHB7Q9Y5E2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB7Q9Y5E2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB7Q9Y5E2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHB7Q9Y5E2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB7Q9Y5E2 AP004609.3-201ENST00000610705 1884 ntBASIC26.06■■□□□ 1.76
PCDHB7Q9Y5E2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB7Q9Y5E2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHB7Q9Y5E2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB7Q9Y5E2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PCDHB7Q9Y5E2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB7Q9Y5E2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB7Q9Y5E2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB7Q9Y5E2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB7Q9Y5E2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB7Q9Y5E2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB7Q9Y5E2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.05■■□□□ 1.76
PCDHB7Q9Y5E2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHB7Q9Y5E2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.04■■□□□ 1.76
PCDHB7Q9Y5E2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.04■■□□□ 1.76
PCDHB7Q9Y5E2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
PCDHB7Q9Y5E2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHB7Q9Y5E2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHB7Q9Y5E2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB7Q9Y5E2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHB7Q9Y5E2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHB7Q9Y5E2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 AC120024.1-201ENST00000562672 995 ntBASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 AC019069.1-201ENST00000610008 1333 ntBASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
PCDHB7Q9Y5E2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB7Q9Y5E2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB7Q9Y5E2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PCDHB7Q9Y5E2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHB7Q9Y5E2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHB7Q9Y5E2 AC137630.3-201ENST00000607245 391 ntBASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms