Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCNL1Q9UK58 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CCNL1Q9UK58 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCNL1Q9UK58 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCNL1Q9UK58 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCNL1Q9UK58 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.2■■■□□ 2.59
CCNL1Q9UK58 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCNL1Q9UK58 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCNL1Q9UK58 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CCNL1Q9UK58 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.2■■■□□ 2.58
CCNL1Q9UK58 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CCNL1Q9UK58 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
CCNL1Q9UK58 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.18■■■□□ 2.58
CCNL1Q9UK58 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.18■■■□□ 2.58
CCNL1Q9UK58 AC110285.6-201ENST00000617652 491 ntBASIC31.18■■■□□ 2.58
CCNL1Q9UK58 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCNL1Q9UK58 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCNL1Q9UK58 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
CCNL1Q9UK58 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCNL1Q9UK58 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCNL1Q9UK58 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCNL1Q9UK58 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
CCNL1Q9UK58 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.15■■■□□ 2.58
CCNL1Q9UK58 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCNL1Q9UK58 AL117332.1-201ENST00000622628 974 ntBASIC31.15■■■□□ 2.58
CCNL1Q9UK58 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.15■■■□□ 2.58
CCNL1Q9UK58 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCNL1Q9UK58 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
CCNL1Q9UK58 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCNL1Q9UK58 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCNL1Q9UK58 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
CCNL1Q9UK58 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.14■■■□□ 2.58
CCNL1Q9UK58 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.14■■■□□ 2.58
CCNL1Q9UK58 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.13■■■□□ 2.57
CCNL1Q9UK58 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCNL1Q9UK58 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCNL1Q9UK58 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.11■■■□□ 2.57
CCNL1Q9UK58 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.11■■■□□ 2.57
CCNL1Q9UK58 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.11■■■□□ 2.57
CCNL1Q9UK58 AC005837.3-201ENST00000612163 286 ntBASIC31.11■■■□□ 2.57
CCNL1Q9UK58 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CCNL1Q9UK58 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CCNL1Q9UK58 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.1■■■□□ 2.57
CCNL1Q9UK58 MIR3621-201ENST00000580529 85 ntBASIC31.09■■■□□ 2.57
CCNL1Q9UK58 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCNL1Q9UK58 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.08■■■□□ 2.57
CCNL1Q9UK58 AC096631.2-201ENST00000436136 790 ntBASIC31.08■■■□□ 2.57
CCNL1Q9UK58 AC010997.5-201ENST00000609182 354 ntBASIC31.08■■■□□ 2.57
CCNL1Q9UK58 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCNL1Q9UK58 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCNL1Q9UK58 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCNL1Q9UK58 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CCNL1Q9UK58 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCNL1Q9UK58 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCNL1Q9UK58 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
CCNL1Q9UK58 MIR4281-201ENST00000580852 62 ntBASIC31.07■■■□□ 2.56
CCNL1Q9UK58 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCNL1Q9UK58 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.07■■■□□ 2.56
CCNL1Q9UK58 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCNL1Q9UK58 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCNL1Q9UK58 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CCNL1Q9UK58 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.05■■■□□ 2.56
CCNL1Q9UK58 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.05■■■□□ 2.56
CCNL1Q9UK58 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCNL1Q9UK58 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCNL1Q9UK58 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCNL1Q9UK58 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.04■■■□□ 2.56
CCNL1Q9UK58 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.04■■■□□ 2.56
CCNL1Q9UK58 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCNL1Q9UK58 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
CCNL1Q9UK58 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.03■■■□□ 2.56
CCNL1Q9UK58 MIR6724-1-201ENST00000616420 92 ntBASIC31.03■■■□□ 2.56
CCNL1Q9UK58 MIR6724-2-201ENST00000616483 92 ntBASIC31.03■■■□□ 2.56
CCNL1Q9UK58 MIR6724-4-201ENST00000617390 92 ntBASIC31.03■■■□□ 2.56
CCNL1Q9UK58 MIR6724-3-201ENST00000622482 92 ntBASIC31.03■■■□□ 2.56
CCNL1Q9UK58 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCNL1Q9UK58 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.03■■■□□ 2.56
CCNL1Q9UK58 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCNL1Q9UK58 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CCNL1Q9UK58 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCNL1Q9UK58 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCNL1Q9UK58 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.02■■■□□ 2.56
CCNL1Q9UK58 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCNL1Q9UK58 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
CCNL1Q9UK58 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
CCNL1Q9UK58 MIR4466-201ENST00000606121 54 ntBASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms