Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN2Q9UHD9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN2Q9UHD9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN2Q9UHD9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN2Q9UHD9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN2Q9UHD9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBQLN2Q9UHD9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN2Q9UHD9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN2Q9UHD9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBQLN2Q9UHD9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN2Q9UHD9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UBQLN2Q9UHD9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN2Q9UHD9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN2Q9UHD9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN2Q9UHD9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 MIR762-201ENST00000390236 83 ntBASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN2Q9UHD9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN2Q9UHD9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.03■□□□□ 0.8
UBQLN2Q9UHD9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN2Q9UHD9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN2Q9UHD9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN2Q9UHD9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.03■□□□□ 0.8
UBQLN2Q9UHD9 AP004609.3-201ENST00000610705 1884 ntBASIC20.03■□□□□ 0.8
UBQLN2Q9UHD9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN2Q9UHD9 AC018358.1-201ENST00000631079 1402 ntBASIC20.02■□□□□ 0.79
UBQLN2Q9UHD9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBQLN2Q9UHD9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 CHML-205ENST00000638160 705 ntTSL 3 BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN2Q9UHD9 LINC01124-201ENST00000409786 2117 ntBASIC20■□□□□ 0.79
UBQLN2Q9UHD9 AL117328.2-201ENST00000624617 1940 ntBASIC20■□□□□ 0.79
UBQLN2Q9UHD9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN2Q9UHD9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 PKD1P6-201ENST00000343738 4769 ntBASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN2Q9UHD9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN2Q9UHD9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN2Q9UHD9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN2Q9UHD9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN2Q9UHD9 AL162393.1-201ENST00000437852 946 ntBASIC19.97■□□□□ 0.79
UBQLN2Q9UHD9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN2Q9UHD9 AC005559.1-201ENST00000589661 871 ntBASIC19.97■□□□□ 0.79
UBQLN2Q9UHD9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms