Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAR1Q9NY12 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.25■□□□□ 0.67
GAR1Q9NY12 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GAR1Q9NY12 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.25■□□□□ 0.67
GAR1Q9NY12 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAR1Q9NY12 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAR1Q9NY12 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAR1Q9NY12 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAR1Q9NY12 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GAR1Q9NY12 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAR1Q9NY12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAR1Q9NY12 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAR1Q9NY12 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAR1Q9NY12 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GAR1Q9NY12 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAR1Q9NY12 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAR1Q9NY12 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
GAR1Q9NY12 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAR1Q9NY12 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.23■□□□□ 0.67
GAR1Q9NY12 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAR1Q9NY12 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAR1Q9NY12 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAR1Q9NY12 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GAR1Q9NY12 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GAR1Q9NY12 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAR1Q9NY12 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAR1Q9NY12 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAR1Q9NY12 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GAR1Q9NY12 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.22■□□□□ 0.67
GAR1Q9NY12 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.22■□□□□ 0.67
GAR1Q9NY12 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.22■□□□□ 0.67
GAR1Q9NY12 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAR1Q9NY12 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAR1Q9NY12 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.22■□□□□ 0.67
GAR1Q9NY12 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAR1Q9NY12 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAR1Q9NY12 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GAR1Q9NY12 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GAR1Q9NY12 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAR1Q9NY12 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GAR1Q9NY12 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GAR1Q9NY12 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAR1Q9NY12 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GAR1Q9NY12 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.21■□□□□ 0.67
GAR1Q9NY12 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GAR1Q9NY12 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAR1Q9NY12 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAR1Q9NY12 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.2■□□□□ 0.66
GAR1Q9NY12 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
GAR1Q9NY12 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAR1Q9NY12 AP004609.3-201ENST00000610705 1884 ntBASIC19.2■□□□□ 0.66
GAR1Q9NY12 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAR1Q9NY12 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GAR1Q9NY12 AC142472.1-201ENST00000612013 1741 ntBASIC19.2■□□□□ 0.66
GAR1Q9NY12 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.2■□□□□ 0.66
GAR1Q9NY12 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GAR1Q9NY12 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
GAR1Q9NY12 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAR1Q9NY12 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAR1Q9NY12 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.19■□□□□ 0.66
GAR1Q9NY12 MIR3648-2-201ENST00000581792 180 ntBASIC19.19■□□□□ 0.66
GAR1Q9NY12 MIR3648-1-201ENST00000615959 180 ntBASIC19.19■□□□□ 0.66
GAR1Q9NY12 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAR1Q9NY12 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAR1Q9NY12 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GAR1Q9NY12 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAR1Q9NY12 MIR219A2-201ENST00000608502 1504 ntBASIC19.19■□□□□ 0.66
GAR1Q9NY12 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
GAR1Q9NY12 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAR1Q9NY12 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAR1Q9NY12 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAR1Q9NY12 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GAR1Q9NY12 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAR1Q9NY12 AC126177.7-201ENST00000547904 679 ntBASIC19.18■□□□□ 0.66
GAR1Q9NY12 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAR1Q9NY12 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GAR1Q9NY12 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAR1Q9NY12 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAR1Q9NY12 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAR1Q9NY12 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAR1Q9NY12 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.17■□□□□ 0.66
GAR1Q9NY12 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAR1Q9NY12 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAR1Q9NY12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAR1Q9NY12 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.16■□□□□ 0.66
GAR1Q9NY12 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
GAR1Q9NY12 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
GAR1Q9NY12 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAR1Q9NY12 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAR1Q9NY12 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GAR1Q9NY12 CR559946.2-201ENST00000623684 991 ntBASIC19.15■□□□□ 0.66
GAR1Q9NY12 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.15■□□□□ 0.66
GAR1Q9NY12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAR1Q9NY12 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAR1Q9NY12 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GAR1Q9NY12 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAR1Q9NY12 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAR1Q9NY12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAR1Q9NY12 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GAR1Q9NY12 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms