Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC35.11■■■■□ 3.21
SLC52A1Q9NWF4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC35.11■■■■□ 3.21
SLC52A1Q9NWF4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SLC52A1Q9NWF4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
SLC52A1Q9NWF4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC35.1■■■■□ 3.21
SLC52A1Q9NWF4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC35.1■■■■□ 3.21
SLC52A1Q9NWF4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
SLC52A1Q9NWF4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
SLC52A1Q9NWF4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC35.09■■■■□ 3.21
SLC52A1Q9NWF4 AC120024.1-201ENST00000562672 995 ntBASIC35.09■■■■□ 3.21
SLC52A1Q9NWF4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC35.09■■■■□ 3.21
SLC52A1Q9NWF4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
SLC52A1Q9NWF4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
SLC52A1Q9NWF4 MIR935-201ENST00000401179 91 ntBASIC35.08■■■■□ 3.21
SLC52A1Q9NWF4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.2
SLC52A1Q9NWF4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC35.06■■■■□ 3.2
SLC52A1Q9NWF4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC35.06■■■■□ 3.2
SLC52A1Q9NWF4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SLC52A1Q9NWF4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SLC52A1Q9NWF4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
SLC52A1Q9NWF4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
SLC52A1Q9NWF4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
SLC52A1Q9NWF4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC35.03■■■■□ 3.2
SLC52A1Q9NWF4 MIR638-201ENST00000385237 100 ntBASIC35.03■■■■□ 3.2
SLC52A1Q9NWF4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC35.03■■■■□ 3.2
SLC52A1Q9NWF4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC35.02■■■■□ 3.2
SLC52A1Q9NWF4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SLC52A1Q9NWF4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
SLC52A1Q9NWF4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC35.01■■■■□ 3.2
SLC52A1Q9NWF4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
SLC52A1Q9NWF4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC35.01■■■■□ 3.19
SLC52A1Q9NWF4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC35.01■■■■□ 3.19
SLC52A1Q9NWF4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
SLC52A1Q9NWF4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC35■■■■□ 3.19
SLC52A1Q9NWF4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC35■■■■□ 3.19
SLC52A1Q9NWF4 AC092028.1-203ENST00000608262 953 ntBASIC35■■■■□ 3.19
SLC52A1Q9NWF4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
SLC52A1Q9NWF4 BX255925.1-201ENST00000566954 1854 ntBASIC34.99■■■■□ 3.19
SLC52A1Q9NWF4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.99■■■■□ 3.19
SLC52A1Q9NWF4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.99■■■■□ 3.19
SLC52A1Q9NWF4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
SLC52A1Q9NWF4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
SLC52A1Q9NWF4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 TSPY9P-201ENST00000440215 945 ntBASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 TSPY11P-201ENST00000442607 1045 ntBASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SLC52A1Q9NWF4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
SLC52A1Q9NWF4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC34.97■■■■□ 3.19
SLC52A1Q9NWF4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC34.97■■■■□ 3.19
SLC52A1Q9NWF4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC34.97■■■■□ 3.19
SLC52A1Q9NWF4 DRD5P2-201ENST00000421395 2012 ntBASIC34.97■■■■□ 3.19
SLC52A1Q9NWF4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC34.97■■■■□ 3.19
SLC52A1Q9NWF4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
SLC52A1Q9NWF4 LINC01003-201ENST00000564834 1764 ntBASIC34.96■■■■□ 3.19
SLC52A1Q9NWF4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.96■■■■□ 3.19
SLC52A1Q9NWF4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
SLC52A1Q9NWF4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
SLC52A1Q9NWF4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC34.95■■■■□ 3.19
SLC52A1Q9NWF4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC34.95■■■■□ 3.19
SLC52A1Q9NWF4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
SLC52A1Q9NWF4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC34.93■■■■□ 3.18
SLC52A1Q9NWF4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
SLC52A1Q9NWF4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
SLC52A1Q9NWF4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.92■■■■□ 3.18
SLC52A1Q9NWF4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SLC52A1Q9NWF4 AC131281.2-201ENST00000520478 145 ntBASIC34.92■■■■□ 3.18
SLC52A1Q9NWF4 AL139246.5-201ENST00000606645 996 ntBASIC34.92■■■■□ 3.18
SLC52A1Q9NWF4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC34.91■■■■□ 3.18
SLC52A1Q9NWF4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC34.91■■■■□ 3.18
SLC52A1Q9NWF4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.91■■■■□ 3.18
SLC52A1Q9NWF4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
SLC52A1Q9NWF4 MIR4281-201ENST00000580852 62 ntBASIC34.9■■■■□ 3.18
SLC52A1Q9NWF4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.9■■■■□ 3.18
SLC52A1Q9NWF4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.89■■■■□ 3.18
SLC52A1Q9NWF4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
SLC52A1Q9NWF4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
SLC52A1Q9NWF4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC34.89■■■■□ 3.18
SLC52A1Q9NWF4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
SLC52A1Q9NWF4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC34.88■■■■□ 3.17
SLC52A1Q9NWF4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
SLC52A1Q9NWF4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC34.88■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms