Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM39AQ9NV64 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
TMEM39AQ9NV64 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.67■■□□□ 1.86
TMEM39AQ9NV64 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM39AQ9NV64 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.66■■□□□ 1.86
TMEM39AQ9NV64 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.66■■□□□ 1.86
TMEM39AQ9NV64 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TMEM39AQ9NV64 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
TMEM39AQ9NV64 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM39AQ9NV64 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM39AQ9NV64 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
TMEM39AQ9NV64 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.65■■□□□ 1.86
TMEM39AQ9NV64 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM39AQ9NV64 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM39AQ9NV64 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM39AQ9NV64 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.64■■□□□ 1.86
TMEM39AQ9NV64 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
TMEM39AQ9NV64 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
TMEM39AQ9NV64 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.64■■□□□ 1.85
TMEM39AQ9NV64 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TMEM39AQ9NV64 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM39AQ9NV64 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM39AQ9NV64 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.63■■□□□ 1.85
TMEM39AQ9NV64 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
TMEM39AQ9NV64 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.63■■□□□ 1.85
TMEM39AQ9NV64 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.62■■□□□ 1.85
TMEM39AQ9NV64 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM39AQ9NV64 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
TMEM39AQ9NV64 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
TMEM39AQ9NV64 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM39AQ9NV64 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.62■■□□□ 1.85
TMEM39AQ9NV64 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM39AQ9NV64 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.61■■□□□ 1.85
TMEM39AQ9NV64 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
TMEM39AQ9NV64 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM39AQ9NV64 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM39AQ9NV64 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM39AQ9NV64 AC110285.6-201ENST00000617652 491 ntBASIC26.6■■□□□ 1.85
TMEM39AQ9NV64 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM39AQ9NV64 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM39AQ9NV64 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM39AQ9NV64 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.59■■□□□ 1.85
TMEM39AQ9NV64 AC005837.3-201ENST00000612163 286 ntBASIC26.59■■□□□ 1.85
TMEM39AQ9NV64 AL117332.1-201ENST00000622628 974 ntBASIC26.59■■□□□ 1.85
TMEM39AQ9NV64 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.58■■□□□ 1.85
TMEM39AQ9NV64 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
TMEM39AQ9NV64 AC010997.5-201ENST00000609182 354 ntBASIC26.57■■□□□ 1.84
TMEM39AQ9NV64 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.57■■□□□ 1.84
TMEM39AQ9NV64 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM39AQ9NV64 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
TMEM39AQ9NV64 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
TMEM39AQ9NV64 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM39AQ9NV64 MIR3621-201ENST00000580529 85 ntBASIC26.56■■□□□ 1.84
TMEM39AQ9NV64 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM39AQ9NV64 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 AC096631.2-201ENST00000436136 790 ntBASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM39AQ9NV64 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM39AQ9NV64 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.54■■□□□ 1.84
TMEM39AQ9NV64 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TMEM39AQ9NV64 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 MIR4281-201ENST00000580852 62 ntBASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
TMEM39AQ9NV64 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM39AQ9NV64 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
TMEM39AQ9NV64 MIR6724-1-201ENST00000616420 92 ntBASIC26.52■■□□□ 1.84
TMEM39AQ9NV64 MIR6724-2-201ENST00000616483 92 ntBASIC26.52■■□□□ 1.84
TMEM39AQ9NV64 MIR6724-4-201ENST00000617390 92 ntBASIC26.52■■□□□ 1.84
TMEM39AQ9NV64 MIR6724-3-201ENST00000622482 92 ntBASIC26.52■■□□□ 1.84
TMEM39AQ9NV64 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 AL356740.2-201ENST00000601559 647 ntBASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
TMEM39AQ9NV64 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM39AQ9NV64 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM39AQ9NV64 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM39AQ9NV64 MTDHP2-201ENST00000601468 714 ntBASIC26.5■■□□□ 1.83
TMEM39AQ9NV64 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.5■■□□□ 1.83
TMEM39AQ9NV64 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM39AQ9NV64 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM39AQ9NV64 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM39AQ9NV64 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms