Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 SPCS2P3-201ENST00000500401 656 ntBASIC20.59■□□□□ 0.89
MSL2Q9HCI7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MSL2Q9HCI7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.58■□□□□ 0.89
MSL2Q9HCI7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSL2Q9HCI7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MSL2Q9HCI7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
MSL2Q9HCI7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.58■□□□□ 0.89
MSL2Q9HCI7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSL2Q9HCI7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSL2Q9HCI7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MSL2Q9HCI7 DUX4L9-201ENST00000449051 1259 ntBASIC20.57■□□□□ 0.88
MSL2Q9HCI7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MSL2Q9HCI7 AC012354.3-201ENST00000623734 483 ntBASIC20.57■□□□□ 0.88
MSL2Q9HCI7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MSL2Q9HCI7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSL2Q9HCI7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSL2Q9HCI7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MSL2Q9HCI7 AC091060.1-201ENST00000623524 1766 ntBASIC20.55■□□□□ 0.88
MSL2Q9HCI7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSL2Q9HCI7 DUX4L18-201ENST00000553347 1267 ntBASIC20.55■□□□□ 0.88
MSL2Q9HCI7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.55■□□□□ 0.88
MSL2Q9HCI7 AC018755.3-202ENST00000596210 929 ntBASIC20.55■□□□□ 0.88
MSL2Q9HCI7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MSL2Q9HCI7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSL2Q9HCI7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MSL2Q9HCI7 AC004987.1-201ENST00000428627 508 ntBASIC20.54■□□□□ 0.88
MSL2Q9HCI7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.54■□□□□ 0.88
MSL2Q9HCI7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MSL2Q9HCI7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MSL2Q9HCI7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.53■□□□□ 0.88
MSL2Q9HCI7 AL033527.3-201ENST00000566366 1196 ntBASIC20.53■□□□□ 0.88
MSL2Q9HCI7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSL2Q9HCI7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSL2Q9HCI7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSL2Q9HCI7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
MSL2Q9HCI7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSL2Q9HCI7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.52■□□□□ 0.88
MSL2Q9HCI7 MIR6765-201ENST00000614092 87 ntBASIC20.52■□□□□ 0.88
MSL2Q9HCI7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.52■□□□□ 0.88
MSL2Q9HCI7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSL2Q9HCI7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MSL2Q9HCI7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
MSL2Q9HCI7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.51■□□□□ 0.87
MSL2Q9HCI7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.51■□□□□ 0.87
MSL2Q9HCI7 TSPY13P-201ENST00000338964 914 ntBASIC20.51■□□□□ 0.87
MSL2Q9HCI7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.51■□□□□ 0.87
MSL2Q9HCI7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MSL2Q9HCI7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.5■□□□□ 0.87
MSL2Q9HCI7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MSL2Q9HCI7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MSL2Q9HCI7 AC010501.1-201ENST00000606270 1962 ntBASIC20.49■□□□□ 0.87
MSL2Q9HCI7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MSL2Q9HCI7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MSL2Q9HCI7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MSL2Q9HCI7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MSL2Q9HCI7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.49■□□□□ 0.87
MSL2Q9HCI7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.49■□□□□ 0.87
MSL2Q9HCI7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MSL2Q9HCI7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MSL2Q9HCI7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
MSL2Q9HCI7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 AC096887.2-201ENST00000623443 1957 ntBASIC20.47■□□□□ 0.87
MSL2Q9HCI7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 AC145676.1-201ENST00000514988 2004 ntBASIC20.47■□□□□ 0.87
MSL2Q9HCI7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
MSL2Q9HCI7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms