Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RTL8AQ9BWD3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL8AQ9BWD3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RTL8AQ9BWD3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL8AQ9BWD3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL8AQ9BWD3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
RTL8AQ9BWD3 AC096887.2-201ENST00000623443 1957 ntBASIC20.5■□□□□ 0.87
RTL8AQ9BWD3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTL8AQ9BWD3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.49■□□□□ 0.87
RTL8AQ9BWD3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL8AQ9BWD3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL8AQ9BWD3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL8AQ9BWD3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL8AQ9BWD3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.47■□□□□ 0.87
RTL8AQ9BWD3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL8AQ9BWD3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL8AQ9BWD3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL8AQ9BWD3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL8AQ9BWD3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL8AQ9BWD3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL8AQ9BWD3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
RTL8AQ9BWD3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL8AQ9BWD3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL8AQ9BWD3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RTL8AQ9BWD3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTL8AQ9BWD3 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.44■□□□□ 0.86
RTL8AQ9BWD3 HSD17B1P1-201ENST00000590052 955 ntBASIC20.44■□□□□ 0.86
RTL8AQ9BWD3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL8AQ9BWD3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL8AQ9BWD3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RTL8AQ9BWD3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL8AQ9BWD3 AC026202.3-201ENST00000600805 1127 ntBASIC20.43■□□□□ 0.86
RTL8AQ9BWD3 RAP2CP1-202ENST00000605179 643 ntBASIC20.43■□□□□ 0.86
RTL8AQ9BWD3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL8AQ9BWD3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL8AQ9BWD3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL8AQ9BWD3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RTL8AQ9BWD3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTL8AQ9BWD3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTL8AQ9BWD3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 AC020928.2-201ENST00000588717 2197 ntBASIC20.41■□□□□ 0.86
RTL8AQ9BWD3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL8AQ9BWD3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTL8AQ9BWD3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTL8AQ9BWD3 RARRES2P2-201ENST00000394842 485 ntBASIC20.4■□□□□ 0.86
RTL8AQ9BWD3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.4■□□□□ 0.86
RTL8AQ9BWD3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.4■□□□□ 0.86
RTL8AQ9BWD3 AC097639.1-201ENST00000565519 1891 ntBASIC20.39■□□□□ 0.86
RTL8AQ9BWD3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RTL8AQ9BWD3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.39■□□□□ 0.85
RTL8AQ9BWD3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTL8AQ9BWD3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL8AQ9BWD3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL8AQ9BWD3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.39■□□□□ 0.85
RTL8AQ9BWD3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL8AQ9BWD3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 AC133552.2-201ENST00000619106 1032 ntBASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms