Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.98■□□□□ 0.95
VRK1Q99986 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VRK1Q99986 AC026202.3-201ENST00000600805 1127 ntBASIC20.98■□□□□ 0.95
VRK1Q99986 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK1Q99986 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VRK1Q99986 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
VRK1Q99986 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VRK1Q99986 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK1Q99986 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK1Q99986 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK1Q99986 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.97■□□□□ 0.95
VRK1Q99986 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK1Q99986 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK1Q99986 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
VRK1Q99986 AL359504.2-201ENST00000605506 1601 ntBASIC20.96■□□□□ 0.95
VRK1Q99986 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK1Q99986 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.96■□□□□ 0.95
VRK1Q99986 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK1Q99986 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK1Q99986 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK1Q99986 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VRK1Q99986 DUX4L18-201ENST00000553347 1267 ntBASIC20.96■□□□□ 0.95
VRK1Q99986 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.96■□□□□ 0.95
VRK1Q99986 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK1Q99986 AC129492.7-201ENST00000622992 756 ntBASIC20.96■□□□□ 0.95
VRK1Q99986 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.96■□□□□ 0.95
VRK1Q99986 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK1Q99986 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
VRK1Q99986 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VRK1Q99986 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
VRK1Q99986 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VRK1Q99986 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.95■□□□□ 0.94
VRK1Q99986 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.95■□□□□ 0.94
VRK1Q99986 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VRK1Q99986 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VRK1Q99986 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
VRK1Q99986 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VRK1Q99986 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VRK1Q99986 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VRK1Q99986 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.94■□□□□ 0.94
VRK1Q99986 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VRK1Q99986 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VRK1Q99986 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.94■□□□□ 0.94
VRK1Q99986 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.93■□□□□ 0.94
VRK1Q99986 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
VRK1Q99986 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VRK1Q99986 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VRK1Q99986 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VRK1Q99986 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VRK1Q99986 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.93■□□□□ 0.94
VRK1Q99986 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
VRK1Q99986 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.93■□□□□ 0.94
VRK1Q99986 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VRK1Q99986 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.93■□□□□ 0.94
VRK1Q99986 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VRK1Q99986 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VRK1Q99986 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VRK1Q99986 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.93■□□□□ 0.94
VRK1Q99986 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VRK1Q99986 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK1Q99986 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK1Q99986 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK1Q99986 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VRK1Q99986 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK1Q99986 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK1Q99986 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VRK1Q99986 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VRK1Q99986 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VRK1Q99986 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK1Q99986 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VRK1Q99986 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.91■□□□□ 0.94
VRK1Q99986 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK1Q99986 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK1Q99986 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK1Q99986 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK1Q99986 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
VRK1Q99986 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.9■□□□□ 0.94
VRK1Q99986 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
VRK1Q99986 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VRK1Q99986 AC145676.1-201ENST00000514988 2004 ntBASIC20.89■□□□□ 0.93
VRK1Q99986 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VRK1Q99986 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VRK1Q99986 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VRK1Q99986 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.89■□□□□ 0.93
VRK1Q99986 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VRK1Q99986 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK1Q99986 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK1Q99986 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
VRK1Q99986 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VRK1Q99986 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK1Q99986 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.88■□□□□ 0.93
VRK1Q99986 RAP2CP1-202ENST00000605179 643 ntBASIC20.88■□□□□ 0.93
VRK1Q99986 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VRK1Q99986 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.88■□□□□ 0.93
VRK1Q99986 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK1Q99986 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VRK1Q99986 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.87■□□□□ 0.93
VRK1Q99986 BHLHE23-202ENST00000612929 1109 ntBASIC20.87■□□□□ 0.93
VRK1Q99986 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.87■□□□□ 0.93
VRK1Q99986 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms