Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 AC008406.3-201ENST00000620001 1374 ntBASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC46A1Q96NT5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC46A1Q96NT5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.14■■□□□ 1.3
SLC46A1Q96NT5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC46A1Q96NT5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC46A1Q96NT5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC46A1Q96NT5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SLC46A1Q96NT5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 KRT125P-201ENST00000546827 989 ntBASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC46A1Q96NT5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SLC46A1Q96NT5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SLC46A1Q96NT5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 AC022616.5-201ENST00000518796 181 ntBASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 MIR4787-201ENST00000607364 84 ntBASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLC46A1Q96NT5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.08■■□□□ 1.28
SLC46A1Q96NT5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SLC46A1Q96NT5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 KRT18P10-201ENST00000388836 1287 ntBASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 BX664725.1-201ENST00000438252 379 ntBASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 MIR935-201ENST00000401179 91 ntBASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 KRT18P24-201ENST00000344739 1156 ntBASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 UNC93B8-201ENST00000511903 705 ntBASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 AL449106.1-201ENST00000608517 1980 ntBASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC46A1Q96NT5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms