Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC46A1Q96NT5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 AC008406.3-201ENST00000620001 1374 ntBASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC46A1Q96NT5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC46A1Q96NT5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC46A1Q96NT5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.14■■□□□ 1.3
SLC46A1Q96NT5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC46A1Q96NT5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC46A1Q96NT5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC46A1Q96NT5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC46A1Q96NT5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC46A1Q96NT5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SLC46A1Q96NT5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 KRT125P-201ENST00000546827 989 ntBASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC46A1Q96NT5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC46A1Q96NT5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SLC46A1Q96NT5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SLC46A1Q96NT5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 AC022616.5-201ENST00000518796 181 ntBASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 MIR4787-201ENST00000607364 84 ntBASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SLC46A1Q96NT5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC46A1Q96NT5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLC46A1Q96NT5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.08■■□□□ 1.28
SLC46A1Q96NT5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SLC46A1Q96NT5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 KRT18P10-201ENST00000388836 1287 ntBASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 BX664725.1-201ENST00000438252 379 ntBASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SLC46A1Q96NT5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 MIR935-201ENST00000401179 91 ntBASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLC46A1Q96NT5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC46A1Q96NT5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.04■■□□□ 1.28
SLC46A1Q96NT5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SLC46A1Q96NT5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SLC46A1Q96NT5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 KRT18P24-201ENST00000344739 1156 ntBASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 UNC93B8-201ENST00000511903 705 ntBASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 AL449106.1-201ENST00000608517 1980 ntBASIC23.01■■□□□ 1.27
SLC46A1Q96NT5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC46A1Q96NT5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms