Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SYNPOQ8N3V7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.63■■□□□ 1.53
SYNPOQ8N3V7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.63■■□□□ 1.53
SYNPOQ8N3V7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SYNPOQ8N3V7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
SYNPOQ8N3V7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.62■■□□□ 1.53
SYNPOQ8N3V7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SYNPOQ8N3V7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.61■■□□□ 1.53
SYNPOQ8N3V7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.61■■□□□ 1.53
SYNPOQ8N3V7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.61■■□□□ 1.53
SYNPOQ8N3V7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.6■■□□□ 1.53
SYNPOQ8N3V7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SYNPOQ8N3V7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SYNPOQ8N3V7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
SYNPOQ8N3V7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SYNPOQ8N3V7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SYNPOQ8N3V7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.59■■□□□ 1.53
SYNPOQ8N3V7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.59■■□□□ 1.53
SYNPOQ8N3V7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.59■■□□□ 1.53
SYNPOQ8N3V7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
SYNPOQ8N3V7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SYNPOQ8N3V7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SYNPOQ8N3V7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.58■■□□□ 1.53
SYNPOQ8N3V7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.58■■□□□ 1.53
SYNPOQ8N3V7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
SYNPOQ8N3V7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SYNPOQ8N3V7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
SYNPOQ8N3V7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.57■■□□□ 1.52
SYNPOQ8N3V7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SYNPOQ8N3V7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SYNPOQ8N3V7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SYNPOQ8N3V7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SYNPOQ8N3V7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 AC137630.3-201ENST00000607245 391 ntBASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SYNPOQ8N3V7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.54■■□□□ 1.52
SYNPOQ8N3V7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SYNPOQ8N3V7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.54■■□□□ 1.52
SYNPOQ8N3V7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
SYNPOQ8N3V7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SYNPOQ8N3V7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SYNPOQ8N3V7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
SYNPOQ8N3V7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 KRT16P3-201ENST00000439127 1283 ntBASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 UNC93B8-201ENST00000511903 705 ntBASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.53■■□□□ 1.52
SYNPOQ8N3V7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SYNPOQ8N3V7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SYNPOQ8N3V7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.51■■□□□ 1.51
SYNPOQ8N3V7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SYNPOQ8N3V7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SYNPOQ8N3V7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SYNPOQ8N3V7 DRD5P2-201ENST00000421395 2012 ntBASIC24.5■■□□□ 1.51
SYNPOQ8N3V7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SYNPOQ8N3V7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SYNPOQ8N3V7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SYNPOQ8N3V7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.49■■□□□ 1.51
SYNPOQ8N3V7 AC021242.3-201ENST00000607598 1377 ntBASIC24.49■■□□□ 1.51
SYNPOQ8N3V7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SYNPOQ8N3V7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SYNPOQ8N3V7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SYNPOQ8N3V7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.48■■□□□ 1.51
SYNPOQ8N3V7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SYNPOQ8N3V7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SYNPOQ8N3V7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.47■■□□□ 1.51
SYNPOQ8N3V7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.47■■□□□ 1.51
SYNPOQ8N3V7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.47■■□□□ 1.51
SYNPOQ8N3V7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SYNPOQ8N3V7 AL449106.1-201ENST00000608517 1980 ntBASIC24.47■■□□□ 1.51
SYNPOQ8N3V7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SYNPOQ8N3V7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SYNPOQ8N3V7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SYNPOQ8N3V7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SYNPOQ8N3V7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.46■■□□□ 1.51
SYNPOQ8N3V7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.46■■□□□ 1.51
SYNPOQ8N3V7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SYNPOQ8N3V7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.51
SYNPOQ8N3V7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
SYNPOQ8N3V7 AC120024.1-201ENST00000562672 995 ntBASIC24.45■■□□□ 1.5
SYNPOQ8N3V7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.45■■□□□ 1.5
SYNPOQ8N3V7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SYNPOQ8N3V7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
SYNPOQ8N3V7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SYNPOQ8N3V7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms