Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFA11Q86Y39 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFA11Q86Y39 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFA11Q86Y39 AC239859.2-201ENST00000444165 318 ntBASIC18.66■□□□□ 0.58
NDUFA11Q86Y39 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.66■□□□□ 0.58
NDUFA11Q86Y39 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.66■□□□□ 0.58
NDUFA11Q86Y39 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFA11Q86Y39 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFA11Q86Y39 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFA11Q86Y39 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NDUFA11Q86Y39 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 AL592295.1-201ENST00000400984 884 ntBASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 AL356441.2-201ENST00000443009 864 ntBASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFA11Q86Y39 AC142472.1-201ENST00000612013 1741 ntBASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 KRT125P-201ENST00000546827 989 ntBASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.63■□□□□ 0.57
NDUFA11Q86Y39 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 BX255925.1-201ENST00000566954 1854 ntBASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 AC135731.1-201ENST00000569415 2548 ntBASIC18.62■□□□□ 0.57
NDUFA11Q86Y39 BX664725.1-201ENST00000438252 379 ntBASIC18.61■□□□□ 0.57
NDUFA11Q86Y39 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
NDUFA11Q86Y39 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NDUFA11Q86Y39 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDUFA11Q86Y39 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 KRT18P24-201ENST00000344739 1156 ntBASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDUFA11Q86Y39 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NDUFA11Q86Y39 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NDUFA11Q86Y39 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDUFA11Q86Y39 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDUFA11Q86Y39 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
NDUFA11Q86Y39 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
NDUFA11Q86Y39 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFA11Q86Y39 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFA11Q86Y39 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFA11Q86Y39 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFA11Q86Y39 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms