Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.01■■□□□ 1.91
RNF180Q86T96 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.01■■□□□ 1.91
RNF180Q86T96 ABCB10P1-201ENST00000614297 2181 ntBASIC27.01■■□□□ 1.91
RNF180Q86T96 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RNF180Q86T96 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27■■□□□ 1.91
RNF180Q86T96 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27■■□□□ 1.91
RNF180Q86T96 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF180Q86T96 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF180Q86T96 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RNF180Q86T96 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.99■■□□□ 1.91
RNF180Q86T96 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
RNF180Q86T96 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF180Q86T96 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
RNF180Q86T96 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF180Q86T96 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF180Q86T96 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF180Q86T96 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF180Q86T96 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF180Q86T96 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF180Q86T96 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
RNF180Q86T96 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.97■■□□□ 1.91
RNF180Q86T96 AC092028.1-203ENST00000608262 953 ntBASIC26.97■■□□□ 1.91
RNF180Q86T96 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RNF180Q86T96 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF180Q86T96 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RNF180Q86T96 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF180Q86T96 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RNF180Q86T96 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.96■■□□□ 1.91
RNF180Q86T96 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RNF180Q86T96 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RNF180Q86T96 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.96■■□□□ 1.91
RNF180Q86T96 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.96■■□□□ 1.91
RNF180Q86T96 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF180Q86T96 AL139246.5-201ENST00000606645 996 ntBASIC26.96■■□□□ 1.91
RNF180Q86T96 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF180Q86T96 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RNF180Q86T96 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
RNF180Q86T96 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.95■■□□□ 1.91
RNF180Q86T96 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF180Q86T96 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF180Q86T96 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.95■■□□□ 1.9
RNF180Q86T96 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF180Q86T96 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.95■■□□□ 1.9
RNF180Q86T96 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF180Q86T96 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF180Q86T96 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF180Q86T96 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RNF180Q86T96 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF180Q86T96 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.94■■□□□ 1.9
RNF180Q86T96 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.9
RNF180Q86T96 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF180Q86T96 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.93■■□□□ 1.9
RNF180Q86T96 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF180Q86T96 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF180Q86T96 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF180Q86T96 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.92■■□□□ 1.9
RNF180Q86T96 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF180Q86T96 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RNF180Q86T96 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.92■■□□□ 1.9
RNF180Q86T96 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF180Q86T96 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.92■■□□□ 1.9
RNF180Q86T96 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.92■■□□□ 1.9
RNF180Q86T96 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.92■■□□□ 1.9
RNF180Q86T96 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RNF180Q86T96 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
RNF180Q86T96 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF180Q86T96 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF180Q86T96 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.91■■□□□ 1.9
RNF180Q86T96 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.91■■□□□ 1.9
RNF180Q86T96 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
RNF180Q86T96 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RNF180Q86T96 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RNF180Q86T96 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF180Q86T96 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
RNF180Q86T96 AC131281.2-201ENST00000520478 145 ntBASIC26.9■■□□□ 1.9
RNF180Q86T96 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RNF180Q86T96 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF180Q86T96 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.9■■□□□ 1.9
RNF180Q86T96 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
RNF180Q86T96 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RNF180Q86T96 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.89■■□□□ 1.9
RNF180Q86T96 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF180Q86T96 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.88■■□□□ 1.89
RNF180Q86T96 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF180Q86T96 MIR4281-201ENST00000580852 62 ntBASIC26.87■■□□□ 1.89
RNF180Q86T96 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF180Q86T96 BX255925.1-201ENST00000566954 1854 ntBASIC26.87■■□□□ 1.89
RNF180Q86T96 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF180Q86T96 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF180Q86T96 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RNF180Q86T96 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.86■■□□□ 1.89
RNF180Q86T96 AL136116.3-201ENST00000402907 1138 ntBASIC26.86■■□□□ 1.89
RNF180Q86T96 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RNF180Q86T96 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF180Q86T96 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF180Q86T96 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.85■■□□□ 1.89
RNF180Q86T96 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF180Q86T96 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF180Q86T96 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF180Q86T96 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms