Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.4■■■□□ 2.62
RGPD4Q7Z3J3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
RGPD4Q7Z3J3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
RGPD4Q7Z3J3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
RGPD4Q7Z3J3 AC010997.5-201ENST00000609182 354 ntBASIC31.39■■■□□ 2.62
RGPD4Q7Z3J3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.39■■■□□ 2.61
RGPD4Q7Z3J3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.38■■■□□ 2.61
RGPD4Q7Z3J3 AC106739.1-201ENST00000617035 715 ntBASIC31.38■■■□□ 2.61
RGPD4Q7Z3J3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RGPD4Q7Z3J3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
RGPD4Q7Z3J3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RGPD4Q7Z3J3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RGPD4Q7Z3J3 SUDS3P1-201ENST00000505831 966 ntBASIC31.36■■■□□ 2.61
RGPD4Q7Z3J3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.36■■■□□ 2.61
RGPD4Q7Z3J3 MIR5787-201ENST00000611784 55 ntBASIC31.35■■■□□ 2.61
RGPD4Q7Z3J3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.35■■■□□ 2.61
RGPD4Q7Z3J3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.35■■■□□ 2.61
RGPD4Q7Z3J3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
RGPD4Q7Z3J3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
RGPD4Q7Z3J3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RGPD4Q7Z3J3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.34■■■□□ 2.61
RGPD4Q7Z3J3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
RGPD4Q7Z3J3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RGPD4Q7Z3J3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
RGPD4Q7Z3J3 AL031432.3-201ENST00000607698 485 ntBASIC31.33■■■□□ 2.61
RGPD4Q7Z3J3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.33■■■□□ 2.61
RGPD4Q7Z3J3 ST7-AS1-201ENST00000456775 1889 ntBASIC31.32■■■□□ 2.6
RGPD4Q7Z3J3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RGPD4Q7Z3J3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.31■■■□□ 2.6
RGPD4Q7Z3J3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.31■■■□□ 2.6
RGPD4Q7Z3J3 AL356740.2-201ENST00000601559 647 ntBASIC31.31■■■□□ 2.6
RGPD4Q7Z3J3 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.3■■■□□ 2.6
RGPD4Q7Z3J3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RGPD4Q7Z3J3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RGPD4Q7Z3J3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RGPD4Q7Z3J3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RGPD4Q7Z3J3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
RGPD4Q7Z3J3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
RGPD4Q7Z3J3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
RGPD4Q7Z3J3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RGPD4Q7Z3J3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RGPD4Q7Z3J3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
RGPD4Q7Z3J3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
RGPD4Q7Z3J3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RGPD4Q7Z3J3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RGPD4Q7Z3J3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.28■■■□□ 2.6
RGPD4Q7Z3J3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.28■■■□□ 2.6
RGPD4Q7Z3J3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
RGPD4Q7Z3J3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
RGPD4Q7Z3J3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.27■■■□□ 2.6
RGPD4Q7Z3J3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RGPD4Q7Z3J3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
RGPD4Q7Z3J3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RGPD4Q7Z3J3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
RGPD4Q7Z3J3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
RGPD4Q7Z3J3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.26■■■□□ 2.59
RGPD4Q7Z3J3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RGPD4Q7Z3J3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
RGPD4Q7Z3J3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.26■■■□□ 2.59
RGPD4Q7Z3J3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.25■■■□□ 2.59
RGPD4Q7Z3J3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RGPD4Q7Z3J3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RGPD4Q7Z3J3 AC142381.2-201ENST00000566120 298 ntBASIC31.24■■■□□ 2.59
RGPD4Q7Z3J3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.24■■■□□ 2.59
RGPD4Q7Z3J3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RGPD4Q7Z3J3 AC011551.1-201ENST00000614101 683 ntBASIC31.22■■■□□ 2.59
RGPD4Q7Z3J3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.22■■■□□ 2.59
RGPD4Q7Z3J3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RGPD4Q7Z3J3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RGPD4Q7Z3J3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
RGPD4Q7Z3J3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RGPD4Q7Z3J3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.21■■■□□ 2.59
RGPD4Q7Z3J3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.21■■■□□ 2.59
RGPD4Q7Z3J3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.21■■■□□ 2.59
RGPD4Q7Z3J3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RGPD4Q7Z3J3 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.2■■■□□ 2.59
RGPD4Q7Z3J3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RGPD4Q7Z3J3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RGPD4Q7Z3J3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
RGPD4Q7Z3J3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC31.19■■■□□ 2.58
RGPD4Q7Z3J3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.19■■■□□ 2.58
RGPD4Q7Z3J3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RGPD4Q7Z3J3 ABCB10P3-201ENST00000561950 2166 ntBASIC31.18■■■□□ 2.58
RGPD4Q7Z3J3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
RGPD4Q7Z3J3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms