Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.89■■□□□ 1.09
CHMP1BQ7LBR1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 AC004987.1-201ENST00000428627 508 ntBASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 ATP5G2P3-201ENST00000429083 425 ntBASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CHMP1BQ7LBR1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.87■■□□□ 1.09
CHMP1BQ7LBR1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP1BQ7LBR1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP1BQ7LBR1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP1BQ7LBR1 AC129492.7-201ENST00000622992 756 ntBASIC21.87■■□□□ 1.09
CHMP1BQ7LBR1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CHMP1BQ7LBR1 AC142472.1-201ENST00000612013 1741 ntBASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 AP004609.3-201ENST00000610705 1884 ntBASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 AC018755.3-202ENST00000596210 929 ntBASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP1BQ7LBR1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.85■■□□□ 1.09
CHMP1BQ7LBR1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 DUX4L18-201ENST00000553347 1267 ntBASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.84■■□□□ 1.09
CHMP1BQ7LBR1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.83■■□□□ 1.09
CHMP1BQ7LBR1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP1BQ7LBR1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.83■■□□□ 1.09
CHMP1BQ7LBR1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP1BQ7LBR1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CHMP1BQ7LBR1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.83■■□□□ 1.09
CHMP1BQ7LBR1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHMP1BQ7LBR1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMP1BQ7LBR1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMP1BQ7LBR1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMP1BQ7LBR1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CHMP1BQ7LBR1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMP1BQ7LBR1 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMP1BQ7LBR1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMP1BQ7LBR1 BHLHE23-202ENST00000612929 1109 ntBASIC21.8■■□□□ 1.08
CHMP1BQ7LBR1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 DUX4L9-201ENST00000449051 1259 ntBASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 MIR6765-201ENST00000614092 87 ntBASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMP1BQ7LBR1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHMP1BQ7LBR1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP1BQ7LBR1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.78■■□□□ 1.08
CHMP1BQ7LBR1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CHMP1BQ7LBR1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP1BQ7LBR1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHMP1BQ7LBR1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP1BQ7LBR1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP1BQ7LBR1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP1BQ7LBR1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP1BQ7LBR1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHMP1BQ7LBR1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.77■■□□□ 1.08
CHMP1BQ7LBR1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms