Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 RNF126P1-201ENST00000567452 1320 ntBASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXR1Q6PIV2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXR1Q6PIV2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
FOXR1Q6PIV2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
FOXR1Q6PIV2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
FOXR1Q6PIV2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.8■■□□□ 1.56
FOXR1Q6PIV2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FOXR1Q6PIV2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FOXR1Q6PIV2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.8■■□□□ 1.56
FOXR1Q6PIV2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
FOXR1Q6PIV2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
FOXR1Q6PIV2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
FOXR1Q6PIV2 AC022413.1-201ENST00000624602 984 ntBASIC24.79■■□□□ 1.56
FOXR1Q6PIV2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
FOXR1Q6PIV2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.79■■□□□ 1.56
FOXR1Q6PIV2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
FOXR1Q6PIV2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
FOXR1Q6PIV2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
FOXR1Q6PIV2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.78■■□□□ 1.56
FOXR1Q6PIV2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
FOXR1Q6PIV2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
FOXR1Q6PIV2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
FOXR1Q6PIV2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.77■■□□□ 1.56
FOXR1Q6PIV2 AC142381.3-201ENST00000568208 1670 ntBASIC24.77■■□□□ 1.56
FOXR1Q6PIV2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXR1Q6PIV2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXR1Q6PIV2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXR1Q6PIV2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.76■■□□□ 1.55
FOXR1Q6PIV2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXR1Q6PIV2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXR1Q6PIV2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXR1Q6PIV2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXR1Q6PIV2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXR1Q6PIV2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXR1Q6PIV2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.75■■□□□ 1.55
FOXR1Q6PIV2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
FOXR1Q6PIV2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXR1Q6PIV2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXR1Q6PIV2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 AP002414.2-202ENST00000590929 1450 ntBASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 AC138932.3-201ENST00000567634 1902 ntBASIC24.74■■□□□ 1.55
FOXR1Q6PIV2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
FOXR1Q6PIV2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
FOXR1Q6PIV2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
FOXR1Q6PIV2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
FOXR1Q6PIV2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
FOXR1Q6PIV2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
FOXR1Q6PIV2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
FOXR1Q6PIV2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
FOXR1Q6PIV2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
FOXR1Q6PIV2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXR1Q6PIV2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FOXR1Q6PIV2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.68■■□□□ 1.54
FOXR1Q6PIV2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms