Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TSPY9P-201ENST00000440215 945 ntBASIC26.31■■□□□ 1.8
CNKSR3Q6P9H4 TSPY11P-201ENST00000442607 1045 ntBASIC26.31■■□□□ 1.8
CNKSR3Q6P9H4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CNKSR3Q6P9H4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.31■■□□□ 1.8
CNKSR3Q6P9H4 AC120024.1-201ENST00000562672 995 ntBASIC26.31■■□□□ 1.8
CNKSR3Q6P9H4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.31■■□□□ 1.8
CNKSR3Q6P9H4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
CNKSR3Q6P9H4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CNKSR3Q6P9H4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CNKSR3Q6P9H4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CNKSR3Q6P9H4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CNKSR3Q6P9H4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CNKSR3Q6P9H4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.28■■□□□ 1.8
CNKSR3Q6P9H4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.28■■□□□ 1.8
CNKSR3Q6P9H4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CNKSR3Q6P9H4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CNKSR3Q6P9H4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CNKSR3Q6P9H4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CNKSR3Q6P9H4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.27■■□□□ 1.8
CNKSR3Q6P9H4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CNKSR3Q6P9H4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CNKSR3Q6P9H4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CNKSR3Q6P9H4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.26■■□□□ 1.79
CNKSR3Q6P9H4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CNKSR3Q6P9H4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.26■■□□□ 1.79
CNKSR3Q6P9H4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CNKSR3Q6P9H4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 MIR638-201ENST00000385237 100 ntBASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CNKSR3Q6P9H4 AC092028.1-203ENST00000608262 953 ntBASIC26.24■■□□□ 1.79
CNKSR3Q6P9H4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.24■■□□□ 1.79
CNKSR3Q6P9H4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.23■■□□□ 1.79
CNKSR3Q6P9H4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.23■■□□□ 1.79
CNKSR3Q6P9H4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.23■■□□□ 1.79
CNKSR3Q6P9H4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CNKSR3Q6P9H4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CNKSR3Q6P9H4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CNKSR3Q6P9H4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CNKSR3Q6P9H4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CNKSR3Q6P9H4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CNKSR3Q6P9H4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.22■■□□□ 1.79
CNKSR3Q6P9H4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CNKSR3Q6P9H4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.21■■□□□ 1.79
CNKSR3Q6P9H4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.21■■□□□ 1.79
CNKSR3Q6P9H4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CNKSR3Q6P9H4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CNKSR3Q6P9H4 BX255925.1-201ENST00000566954 1854 ntBASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 AL139246.5-201ENST00000606645 996 ntBASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
CNKSR3Q6P9H4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNKSR3Q6P9H4 AC131281.2-201ENST00000520478 145 ntBASIC26.18■■□□□ 1.78
CNKSR3Q6P9H4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNKSR3Q6P9H4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 MIR4281-201ENST00000580852 62 ntBASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CNKSR3Q6P9H4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 DRD5P2-201ENST00000421395 2012 ntBASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.16■■□□□ 1.78
CNKSR3Q6P9H4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms