Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 KRT18P10-201ENST00000388836 1287 ntBASIC26.81■■□□□ 1.88
TRIM60Q495X7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
TRIM60Q495X7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TRIM60Q495X7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.8■■□□□ 1.88
TRIM60Q495X7 AC110285.6-201ENST00000617652 491 ntBASIC26.8■■□□□ 1.88
TRIM60Q495X7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM60Q495X7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM60Q495X7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM60Q495X7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM60Q495X7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.79■■□□□ 1.88
TRIM60Q495X7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.79■■□□□ 1.88
TRIM60Q495X7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.79■■□□□ 1.88
TRIM60Q495X7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
TRIM60Q495X7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM60Q495X7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM60Q495X7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM60Q495X7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.78■■□□□ 1.88
TRIM60Q495X7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM60Q495X7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM60Q495X7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM60Q495X7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
TRIM60Q495X7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.77■■□□□ 1.88
TRIM60Q495X7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM60Q495X7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
TRIM60Q495X7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.77■■□□□ 1.88
TRIM60Q495X7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM60Q495X7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM60Q495X7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM60Q495X7 AL117332.1-201ENST00000622628 974 ntBASIC26.76■■□□□ 1.87
TRIM60Q495X7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
TRIM60Q495X7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.75■■□□□ 1.87
TRIM60Q495X7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.75■■□□□ 1.87
TRIM60Q495X7 AC005837.3-201ENST00000612163 286 ntBASIC26.75■■□□□ 1.87
TRIM60Q495X7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM60Q495X7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM60Q495X7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM60Q495X7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
TRIM60Q495X7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM60Q495X7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM60Q495X7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.74■■□□□ 1.87
TRIM60Q495X7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.74■■□□□ 1.87
TRIM60Q495X7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM60Q495X7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM60Q495X7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM60Q495X7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM60Q495X7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM60Q495X7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.72■■□□□ 1.87
TRIM60Q495X7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
TRIM60Q495X7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM60Q495X7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM60Q495X7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.71■■□□□ 1.87
TRIM60Q495X7 AC096631.2-201ENST00000436136 790 ntBASIC26.71■■□□□ 1.87
TRIM60Q495X7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.71■■□□□ 1.87
TRIM60Q495X7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TRIM60Q495X7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM60Q495X7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.7■■□□□ 1.86
TRIM60Q495X7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.7■■□□□ 1.86
TRIM60Q495X7 MIR3621-201ENST00000580529 85 ntBASIC26.7■■□□□ 1.86
TRIM60Q495X7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
TRIM60Q495X7 AC010997.5-201ENST00000609182 354 ntBASIC26.7■■□□□ 1.86
TRIM60Q495X7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM60Q495X7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
TRIM60Q495X7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.69■■□□□ 1.86
TRIM60Q495X7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TRIM60Q495X7 MIR4281-201ENST00000580852 62 ntBASIC26.68■■□□□ 1.86
TRIM60Q495X7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM60Q495X7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM60Q495X7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM60Q495X7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
TRIM60Q495X7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.67■■□□□ 1.86
TRIM60Q495X7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.67■■□□□ 1.86
TRIM60Q495X7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
TRIM60Q495X7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM60Q495X7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
TRIM60Q495X7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.66■■□□□ 1.86
TRIM60Q495X7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TRIM60Q495X7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM60Q495X7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
TRIM60Q495X7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
TRIM60Q495X7 MIR4466-201ENST00000606121 54 ntBASIC26.65■■□□□ 1.86
TRIM60Q495X7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM60Q495X7 MIR6724-1-201ENST00000616420 92 ntBASIC26.65■■□□□ 1.86
TRIM60Q495X7 MIR6724-2-201ENST00000616483 92 ntBASIC26.65■■□□□ 1.86
TRIM60Q495X7 MIR6724-4-201ENST00000617390 92 ntBASIC26.65■■□□□ 1.86
TRIM60Q495X7 MIR6724-3-201ENST00000622482 92 ntBASIC26.65■■□□□ 1.86
TRIM60Q495X7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM60Q495X7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.65■■□□□ 1.86
TRIM60Q495X7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.65■■□□□ 1.86
TRIM60Q495X7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM60Q495X7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM60Q495X7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM60Q495X7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM60Q495X7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
TRIM60Q495X7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM60Q495X7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM60Q495X7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
TRIM60Q495X7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TRIM60Q495X7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
TRIM60Q495X7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
TRIM60Q495X7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms