Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 U85056.1-201ENST00000616429 682 ntBASIC25.18■■□□□ 1.62
SCNN1AP37088 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCNN1AP37088 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCNN1AP37088 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCNN1AP37088 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCNN1AP37088 KRT18P10-201ENST00000388836 1287 ntBASIC25.17■■□□□ 1.62
SCNN1AP37088 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SCNN1AP37088 AL592293.1-201ENST00000502889 1188 ntBASIC25.17■■□□□ 1.62
SCNN1AP37088 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SCNN1AP37088 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCNN1AP37088 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.16■■□□□ 1.62
SCNN1AP37088 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCNN1AP37088 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCNN1AP37088 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SCNN1AP37088 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SCNN1AP37088 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
SCNN1AP37088 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.16■■□□□ 1.62
SCNN1AP37088 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.15■■□□□ 1.62
SCNN1AP37088 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCNN1AP37088 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCNN1AP37088 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCNN1AP37088 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCNN1AP37088 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCNN1AP37088 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.14■■□□□ 1.62
SCNN1AP37088 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCNN1AP37088 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.14■■□□□ 1.61
SCNN1AP37088 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCNN1AP37088 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.13■■□□□ 1.61
SCNN1AP37088 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.13■■□□□ 1.61
SCNN1AP37088 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SCNN1AP37088 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCNN1AP37088 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
SCNN1AP37088 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCNN1AP37088 NTF6A-201ENST00000591175 560 ntBASIC25.12■■□□□ 1.61
SCNN1AP37088 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SCNN1AP37088 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCNN1AP37088 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCNN1AP37088 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SCNN1AP37088 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCNN1AP37088 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.11■■□□□ 1.61
SCNN1AP37088 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SCNN1AP37088 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCNN1AP37088 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCNN1AP37088 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCNN1AP37088 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
SCNN1AP37088 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
SCNN1AP37088 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SCNN1AP37088 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.1■■□□□ 1.61
SCNN1AP37088 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCNN1AP37088 AC097639.1-201ENST00000565519 1891 ntBASIC25.09■■□□□ 1.61
SCNN1AP37088 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.09■■□□□ 1.61
SCNN1AP37088 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCNN1AP37088 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.09■■□□□ 1.61
SCNN1AP37088 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SCNN1AP37088 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.08■■□□□ 1.61
SCNN1AP37088 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
SCNN1AP37088 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCNN1AP37088 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCNN1AP37088 KRT18P60-201ENST00000312876 1297 ntBASIC25.08■■□□□ 1.61
SCNN1AP37088 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.08■■□□□ 1.61
SCNN1AP37088 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCNN1AP37088 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
SCNN1AP37088 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCNN1AP37088 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCNN1AP37088 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SCNN1AP37088 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.07■■□□□ 1.6
SCNN1AP37088 SPCS2P3-201ENST00000500401 656 ntBASIC25.07■■□□□ 1.6
SCNN1AP37088 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCNN1AP37088 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.07■■□□□ 1.6
SCNN1AP37088 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
SCNN1AP37088 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SCNN1AP37088 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SCNN1AP37088 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.06■■□□□ 1.6
SCNN1AP37088 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCNN1AP37088 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCNN1AP37088 AC018755.3-202ENST00000596210 929 ntBASIC25.05■■□□□ 1.6
SCNN1AP37088 AC129492.7-201ENST00000622992 756 ntBASIC25.05■■□□□ 1.6
SCNN1AP37088 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SCNN1AP37088 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SCNN1AP37088 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.04■■□□□ 1.6
SCNN1AP37088 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCNN1AP37088 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCNN1AP37088 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.04■■□□□ 1.6
SCNN1AP37088 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.03■■□□□ 1.6
SCNN1AP37088 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCNN1AP37088 DUX4L9-201ENST00000449051 1259 ntBASIC25.03■■□□□ 1.6
SCNN1AP37088 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCNN1AP37088 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCNN1AP37088 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCNN1AP37088 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCNN1AP37088 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.02■■□□□ 1.6
SCNN1AP37088 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCNN1AP37088 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms