Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
GAP43P17677 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
GAP43P17677 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.59■■□□□ 1.85
GAP43P17677 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.59■■□□□ 1.85
GAP43P17677 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
GAP43P17677 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
GAP43P17677 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
GAP43P17677 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
GAP43P17677 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
GAP43P17677 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.58■■□□□ 1.85
GAP43P17677 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
GAP43P17677 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
GAP43P17677 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
GAP43P17677 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
GAP43P17677 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
GAP43P17677 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
GAP43P17677 ABHD17AP5-201ENST00000580133 923 ntBASIC26.57■■□□□ 1.84
GAP43P17677 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
GAP43P17677 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.57■■□□□ 1.84
GAP43P17677 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
GAP43P17677 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
GAP43P17677 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
GAP43P17677 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.56■■□□□ 1.84
GAP43P17677 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
GAP43P17677 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
GAP43P17677 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
GAP43P17677 AL592293.1-201ENST00000502889 1188 ntBASIC26.55■■□□□ 1.84
GAP43P17677 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
GAP43P17677 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
GAP43P17677 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
GAP43P17677 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
GAP43P17677 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
GAP43P17677 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
GAP43P17677 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.54■■□□□ 1.84
GAP43P17677 U85056.1-201ENST00000616429 682 ntBASIC26.54■■□□□ 1.84
GAP43P17677 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.54■■□□□ 1.84
GAP43P17677 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
GAP43P17677 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.54■■□□□ 1.84
GAP43P17677 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
GAP43P17677 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
GAP43P17677 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
GAP43P17677 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
GAP43P17677 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
GAP43P17677 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.52■■□□□ 1.84
GAP43P17677 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.52■■□□□ 1.84
GAP43P17677 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.52■■□□□ 1.84
GAP43P17677 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
GAP43P17677 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
GAP43P17677 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
GAP43P17677 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.51■■□□□ 1.83
GAP43P17677 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
GAP43P17677 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
GAP43P17677 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
GAP43P17677 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GAP43P17677 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GAP43P17677 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
GAP43P17677 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GAP43P17677 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
GAP43P17677 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
GAP43P17677 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GAP43P17677 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GAP43P17677 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
GAP43P17677 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GAP43P17677 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
GAP43P17677 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.49■■□□□ 1.83
GAP43P17677 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GAP43P17677 KRT18P10-201ENST00000388836 1287 ntBASIC26.49■■□□□ 1.83
GAP43P17677 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
GAP43P17677 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
GAP43P17677 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.49■■□□□ 1.83
GAP43P17677 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
GAP43P17677 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
GAP43P17677 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
GAP43P17677 AC097639.1-201ENST00000565519 1891 ntBASIC26.47■■□□□ 1.83
GAP43P17677 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
GAP43P17677 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.47■■□□□ 1.83
GAP43P17677 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.47■■□□□ 1.83
GAP43P17677 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
GAP43P17677 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
GAP43P17677 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
GAP43P17677 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.46■■□□□ 1.83
GAP43P17677 NTF6A-201ENST00000591175 560 ntBASIC26.46■■□□□ 1.83
GAP43P17677 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
GAP43P17677 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
GAP43P17677 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
GAP43P17677 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
GAP43P17677 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.44■■□□□ 1.82
GAP43P17677 KRT18P60-201ENST00000312876 1297 ntBASIC26.44■■□□□ 1.82
GAP43P17677 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
GAP43P17677 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
GAP43P17677 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.44■■□□□ 1.82
GAP43P17677 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
GAP43P17677 SPCS2P3-201ENST00000500401 656 ntBASIC26.43■■□□□ 1.82
GAP43P17677 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
GAP43P17677 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
GAP43P17677 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.42■■□□□ 1.82
GAP43P17677 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.42■■□□□ 1.82
GAP43P17677 AC018755.3-202ENST00000596210 929 ntBASIC26.42■■□□□ 1.82
GAP43P17677 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.41■■□□□ 1.82
GAP43P17677 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms