Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2BFMP0C1H6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H2BFMP0C1H6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.12■□□□□ 0.97
H2BFMP0C1H6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.12■□□□□ 0.97
H2BFMP0C1H6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2BFMP0C1H6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2BFMP0C1H6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2BFMP0C1H6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.11■□□□□ 0.97
H2BFMP0C1H6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2BFMP0C1H6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H2BFMP0C1H6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2BFMP0C1H6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
H2BFMP0C1H6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.1■□□□□ 0.97
H2BFMP0C1H6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 AC142381.3-201ENST00000568208 1670 ntBASIC21.09■□□□□ 0.97
H2BFMP0C1H6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2BFMP0C1H6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2BFMP0C1H6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
H2BFMP0C1H6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2BFMP0C1H6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2BFMP0C1H6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.07■□□□□ 0.96
H2BFMP0C1H6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2BFMP0C1H6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2BFMP0C1H6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H2BFMP0C1H6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2BFMP0C1H6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2BFMP0C1H6 AC022211.4-201ENST00000625094 2161 ntBASIC21.05■□□□□ 0.96
H2BFMP0C1H6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H2BFMP0C1H6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2BFMP0C1H6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2BFMP0C1H6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H2BFMP0C1H6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2BFMP0C1H6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2BFMP0C1H6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2BFMP0C1H6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.04■□□□□ 0.96
H2BFMP0C1H6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
H2BFMP0C1H6 AC060814.1-201ENST00000554326 538 ntBASIC21.04■□□□□ 0.96
H2BFMP0C1H6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.04■□□□□ 0.96
H2BFMP0C1H6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2BFMP0C1H6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.03■□□□□ 0.96
H2BFMP0C1H6 AL157400.5-201ENST00000507624 621 ntBASIC21.03■□□□□ 0.96
H2BFMP0C1H6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.03■□□□□ 0.96
H2BFMP0C1H6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2BFMP0C1H6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2BFMP0C1H6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2BFMP0C1H6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
H2BFMP0C1H6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
H2BFMP0C1H6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H2BFMP0C1H6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2BFMP0C1H6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.01■□□□□ 0.95
H2BFMP0C1H6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2BFMP0C1H6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2BFMP0C1H6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H2BFMP0C1H6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2BFMP0C1H6 MIR639-201ENST00000384974 98 ntBASIC21.01■□□□□ 0.95
H2BFMP0C1H6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms