Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TGFAP01135 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TGFAP01135 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TGFAP01135 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TGFAP01135 DRD5P2-201ENST00000421395 2012 ntBASIC19.88■□□□□ 0.77
TGFAP01135 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TGFAP01135 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TGFAP01135 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TGFAP01135 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TGFAP01135 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.87■□□□□ 0.77
TGFAP01135 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.87■□□□□ 0.77
TGFAP01135 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TGFAP01135 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TGFAP01135 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
TGFAP01135 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TGFAP01135 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TGFAP01135 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TGFAP01135 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.86■□□□□ 0.77
TGFAP01135 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TGFAP01135 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.86■□□□□ 0.77
TGFAP01135 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TGFAP01135 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TGFAP01135 AC139426.1-201ENST00000568218 2529 ntBASIC19.85■□□□□ 0.77
TGFAP01135 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TGFAP01135 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TGFAP01135 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TGFAP01135 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TGFAP01135 KRT18P24-201ENST00000344739 1156 ntBASIC19.84■□□□□ 0.77
TGFAP01135 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.84■□□□□ 0.77
TGFAP01135 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.84■□□□□ 0.77
TGFAP01135 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.84■□□□□ 0.77
TGFAP01135 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TGFAP01135 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TGFAP01135 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TGFAP01135 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TGFAP01135 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TGFAP01135 LINC01003-201ENST00000564834 1764 ntBASIC19.83■□□□□ 0.77
TGFAP01135 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TGFAP01135 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TGFAP01135 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TGFAP01135 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.83■□□□□ 0.77
TGFAP01135 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TGFAP01135 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TGFAP01135 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TGFAP01135 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TGFAP01135 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TGFAP01135 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TGFAP01135 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TGFAP01135 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TGFAP01135 KRT16P3-201ENST00000439127 1283 ntBASIC19.81■□□□□ 0.76
TGFAP01135 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.81■□□□□ 0.76
TGFAP01135 BX255925.1-201ENST00000566954 1854 ntBASIC19.81■□□□□ 0.76
TGFAP01135 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TGFAP01135 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TGFAP01135 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.8■□□□□ 0.76
TGFAP01135 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.8■□□□□ 0.76
TGFAP01135 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TGFAP01135 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TGFAP01135 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TGFAP01135 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 UNC93B8-201ENST00000511903 705 ntBASIC19.79■□□□□ 0.76
TGFAP01135 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.79■□□□□ 0.76
TGFAP01135 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.79■□□□□ 0.76
TGFAP01135 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TGFAP01135 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.78■□□□□ 0.76
TGFAP01135 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TGFAP01135 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.78■□□□□ 0.76
TGFAP01135 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TGFAP01135 TSPY9P-201ENST00000440215 945 ntBASIC19.78■□□□□ 0.76
TGFAP01135 TSPY11P-201ENST00000442607 1045 ntBASIC19.78■□□□□ 0.76
TGFAP01135 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.78■□□□□ 0.76
TGFAP01135 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.78■□□□□ 0.76
TGFAP01135 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.78■□□□□ 0.76
TGFAP01135 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.78■□□□□ 0.76
TGFAP01135 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TGFAP01135 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TGFAP01135 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TGFAP01135 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
TGFAP01135 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.77■□□□□ 0.76
TGFAP01135 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.77■□□□□ 0.76
TGFAP01135 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TGFAP01135 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TGFAP01135 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TGFAP01135 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TGFAP01135 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TGFAP01135 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TGFAP01135 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TGFAP01135 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.76■□□□□ 0.75
TGFAP01135 AC120024.1-201ENST00000562672 995 ntBASIC19.76■□□□□ 0.75
TGFAP01135 AC137630.3-201ENST00000607245 391 ntBASIC19.76■□□□□ 0.75
TGFAP01135 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TGFAP01135 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TGFAP01135 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TGFAP01135 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms