Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.89■■□□□ 1.41
SOD1P00441 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.89■■□□□ 1.41
SOD1P00441 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SOD1P00441 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SOD1P00441 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SOD1P00441 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SOD1P00441 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SOD1P00441 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SOD1P00441 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SOD1P00441 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SOD1P00441 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SOD1P00441 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SOD1P00441 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SOD1P00441 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SOD1P00441 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SOD1P00441 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SOD1P00441 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SOD1P00441 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SOD1P00441 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SOD1P00441 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOD1P00441 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.84■■□□□ 1.41
SOD1P00441 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.84■■□□□ 1.41
SOD1P00441 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.84■■□□□ 1.41
SOD1P00441 AC087393.1-201ENST00000582896 145 ntBASIC23.84■■□□□ 1.41
SOD1P00441 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOD1P00441 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SOD1P00441 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SOD1P00441 RPS2P7-201ENST00000447334 885 ntBASIC23.83■■□□□ 1.41
SOD1P00441 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SOD1P00441 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SOD1P00441 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.83■■□□□ 1.4
SOD1P00441 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
SOD1P00441 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.83■■□□□ 1.4
SOD1P00441 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.83■■□□□ 1.4
SOD1P00441 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SOD1P00441 ERN1-208ENST00000606895 2068 ntBASIC23.82■■□□□ 1.4
SOD1P00441 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SOD1P00441 AC010980.1-201ENST00000587192 1142 ntBASIC23.82■■□□□ 1.4
SOD1P00441 PVT1_1.1-201ENST00000615125 194 ntBASIC23.82■■□□□ 1.4
SOD1P00441 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOD1P00441 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SOD1P00441 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOD1P00441 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOD1P00441 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOD1P00441 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.81■■□□□ 1.4
SOD1P00441 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOD1P00441 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SOD1P00441 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SOD1P00441 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.8■■□□□ 1.4
SOD1P00441 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SOD1P00441 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOD1P00441 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.8■■□□□ 1.4
SOD1P00441 AC139795.1-202ENST00000500444 432 ntBASIC23.8■■□□□ 1.4
SOD1P00441 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.8■■□□□ 1.4
SOD1P00441 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.8■■□□□ 1.4
SOD1P00441 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.79■■□□□ 1.4
SOD1P00441 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.79■■□□□ 1.4
SOD1P00441 BHLHE23-202ENST00000612929 1109 ntBASIC23.79■■□□□ 1.4
SOD1P00441 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SOD1P00441 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SOD1P00441 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.78■■□□□ 1.4
SOD1P00441 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SOD1P00441 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SOD1P00441 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.78■■□□□ 1.4
SOD1P00441 AC074183.2-201ENST00000623112 922 ntBASIC23.78■■□□□ 1.4
SOD1P00441 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SOD1P00441 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SOD1P00441 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SOD1P00441 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SOD1P00441 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.78■■□□□ 1.4
SOD1P00441 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.77■■□□□ 1.4
SOD1P00441 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SOD1P00441 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SOD1P00441 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SOD1P00441 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SOD1P00441 AC092803.2-201ENST00000564287 1899 ntBASIC23.77■■□□□ 1.4
SOD1P00441 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SOD1P00441 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SOD1P00441 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.76■■□□□ 1.39
SOD1P00441 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
SOD1P00441 AC096887.2-201ENST00000623443 1957 ntBASIC23.76■■□□□ 1.39
SOD1P00441 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SOD1P00441 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.76■■□□□ 1.39
SOD1P00441 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.76■■□□□ 1.39
SOD1P00441 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SOD1P00441 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.76■■□□□ 1.39
SOD1P00441 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SOD1P00441 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.75■■□□□ 1.39
SOD1P00441 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOD1P00441 KRT18P10-201ENST00000388836 1287 ntBASIC23.75■■□□□ 1.39
SOD1P00441 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOD1P00441 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
SOD1P00441 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SOD1P00441 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.74■■□□□ 1.39
SOD1P00441 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SOD1P00441 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.74■■□□□ 1.39
SOD1P00441 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SOD1P00441 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SOD1P00441 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SOD1P00441 LONRF2P2-201ENST00000439212 571 ntBASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms