Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.2■■□□□ 1.3
SNRNP200O75643 MIR6765-201ENST00000614092 87 ntBASIC23.2■■□□□ 1.3
SNRNP200O75643 AC092803.2-201ENST00000564287 1899 ntBASIC23.19■■□□□ 1.3
SNRNP200O75643 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNRNP200O75643 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.19■■□□□ 1.3
SNRNP200O75643 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.19■■□□□ 1.3
SNRNP200O75643 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.19■■□□□ 1.3
SNRNP200O75643 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNRNP200O75643 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNRNP200O75643 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.18■■□□□ 1.3
SNRNP200O75643 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SNRNP200O75643 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNRNP200O75643 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
SNRNP200O75643 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.18■■□□□ 1.3
SNRNP200O75643 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.18■■□□□ 1.3
SNRNP200O75643 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNRNP200O75643 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNRNP200O75643 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.17■■□□□ 1.3
SNRNP200O75643 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.17■■□□□ 1.3
SNRNP200O75643 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.17■■□□□ 1.3
SNRNP200O75643 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNRNP200O75643 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.16■■□□□ 1.3
SNRNP200O75643 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.16■■□□□ 1.3
SNRNP200O75643 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.15■■□□□ 1.3
SNRNP200O75643 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SNRNP200O75643 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SNRNP200O75643 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.15■■□□□ 1.3
SNRNP200O75643 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP200O75643 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SNRNP200O75643 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SNRNP200O75643 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SNRNP200O75643 PVT1_1.1-201ENST00000615125 194 ntBASIC23.14■■□□□ 1.3
SNRNP200O75643 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SNRNP200O75643 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SNRNP200O75643 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNRNP200O75643 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNRNP200O75643 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.14■■□□□ 1.29
SNRNP200O75643 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNRNP200O75643 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNRNP200O75643 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SNRNP200O75643 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNRNP200O75643 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNRNP200O75643 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNRNP200O75643 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SNRNP200O75643 AC010501.1-201ENST00000606270 1962 ntBASIC23.12■■□□□ 1.29
SNRNP200O75643 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.12■■□□□ 1.29
SNRNP200O75643 DUX4L18-201ENST00000553347 1267 ntBASIC23.12■■□□□ 1.29
SNRNP200O75643 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNRNP200O75643 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.12■■□□□ 1.29
SNRNP200O75643 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNRNP200O75643 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNRNP200O75643 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.11■■□□□ 1.29
SNRNP200O75643 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNRNP200O75643 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNRNP200O75643 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNRNP200O75643 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.1■■□□□ 1.29
SNRNP200O75643 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SNRNP200O75643 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNRNP200O75643 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNRNP200O75643 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP200O75643 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.09■■□□□ 1.29
SNRNP200O75643 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.09■■□□□ 1.29
SNRNP200O75643 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SNRNP200O75643 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.09■■□□□ 1.29
SNRNP200O75643 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.09■■□□□ 1.29
SNRNP200O75643 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP200O75643 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP200O75643 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP200O75643 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP200O75643 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP200O75643 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.09■■□□□ 1.29
SNRNP200O75643 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNRNP200O75643 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SNRNP200O75643 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.08■■□□□ 1.28
SNRNP200O75643 AC139795.1-202ENST00000500444 432 ntBASIC23.08■■□□□ 1.28
SNRNP200O75643 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP200O75643 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.07■■□□□ 1.28
SNRNP200O75643 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP200O75643 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP200O75643 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.07■■□□□ 1.28
SNRNP200O75643 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP200O75643 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP200O75643 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP200O75643 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNRNP200O75643 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.06■■□□□ 1.28
SNRNP200O75643 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.06■■□□□ 1.28
SNRNP200O75643 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNRNP200O75643 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
SNRNP200O75643 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP200O75643 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP200O75643 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP200O75643 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.05■■□□□ 1.28
SNRNP200O75643 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.04■■□□□ 1.28
SNRNP200O75643 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP200O75643 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP200O75643 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
SNRNP200O75643 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP200O75643 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.03■■□□□ 1.28
SNRNP200O75643 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.03■■□□□ 1.28
SNRNP200O75643 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms