Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF1O43189 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF1O43189 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PHF1O43189 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF1O43189 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF1O43189 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF1O43189 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.56■□□□□ 0.88
PHF1O43189 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.56■□□□□ 0.88
PHF1O43189 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF1O43189 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF1O43189 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF1O43189 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF1O43189 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.56■□□□□ 0.88
PHF1O43189 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.55■□□□□ 0.88
PHF1O43189 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF1O43189 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PHF1O43189 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF1O43189 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.55■□□□□ 0.88
PHF1O43189 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF1O43189 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PHF1O43189 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.54■□□□□ 0.88
PHF1O43189 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PHF1O43189 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF1O43189 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF1O43189 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.54■□□□□ 0.88
PHF1O43189 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHF1O43189 AC131212.1-201ENST00000613771 668 ntBASIC20.54■□□□□ 0.88
PHF1O43189 AC129492.7-201ENST00000622992 756 ntBASIC20.54■□□□□ 0.88
PHF1O43189 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHF1O43189 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.54■□□□□ 0.88
PHF1O43189 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.53■□□□□ 0.88
PHF1O43189 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.53■□□□□ 0.88
PHF1O43189 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PHF1O43189 SMPD5-203ENST00000639008 1464 ntBASIC20.53■□□□□ 0.88
PHF1O43189 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHF1O43189 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.53■□□□□ 0.88
PHF1O43189 WHAMMP3-201ENST00000611636 1609 ntBASIC20.53■□□□□ 0.88
PHF1O43189 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHF1O43189 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.52■□□□□ 0.88
PHF1O43189 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PHF1O43189 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PHF1O43189 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHF1O43189 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.51■□□□□ 0.87
PHF1O43189 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PHF1O43189 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PHF1O43189 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PHF1O43189 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PHF1O43189 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PHF1O43189 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHF1O43189 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PHF1O43189 AC092803.2-201ENST00000564287 1899 ntBASIC20.5■□□□□ 0.87
PHF1O43189 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PHF1O43189 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.5■□□□□ 0.87
PHF1O43189 AC007029.1-201ENST00000604183 313 ntBASIC20.5■□□□□ 0.87
PHF1O43189 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PHF1O43189 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PHF1O43189 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PHF1O43189 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
PHF1O43189 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.49■□□□□ 0.87
PHF1O43189 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.49■□□□□ 0.87
PHF1O43189 DUSP8P4-201ENST00000399538 1761 ntBASIC20.49■□□□□ 0.87
PHF1O43189 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PHF1O43189 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.48■□□□□ 0.87
PHF1O43189 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHF1O43189 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
PHF1O43189 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHF1O43189 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHF1O43189 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHF1O43189 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PHF1O43189 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.47■□□□□ 0.87
PHF1O43189 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.46■□□□□ 0.87
PHF1O43189 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHF1O43189 AP004609.3-201ENST00000610705 1884 ntBASIC20.46■□□□□ 0.87
PHF1O43189 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHF1O43189 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHF1O43189 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.46■□□□□ 0.87
PHF1O43189 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHF1O43189 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHF1O43189 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHF1O43189 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHF1O43189 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHF1O43189 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PHF1O43189 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.45■□□□□ 0.86
PHF1O43189 AC025884.2-201ENST00000553429 711 ntBASIC20.45■□□□□ 0.86
PHF1O43189 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.45■□□□□ 0.86
PHF1O43189 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.45■□□□□ 0.86
PHF1O43189 AL359504.2-201ENST00000605506 1601 ntBASIC20.45■□□□□ 0.86
PHF1O43189 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHF1O43189 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHF1O43189 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHF1O43189 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PHF1O43189 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms