Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LRRC53A6NM62 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.92■■□□□ 1.74
LRRC53A6NM62 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
LRRC53A6NM62 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LRRC53A6NM62 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.92■■□□□ 1.74
LRRC53A6NM62 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.92■■□□□ 1.74
LRRC53A6NM62 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
LRRC53A6NM62 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
LRRC53A6NM62 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
LRRC53A6NM62 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.91■■□□□ 1.74
LRRC53A6NM62 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LRRC53A6NM62 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.91■■□□□ 1.74
LRRC53A6NM62 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
LRRC53A6NM62 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LRRC53A6NM62 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.91■■□□□ 1.74
LRRC53A6NM62 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.9■■□□□ 1.74
LRRC53A6NM62 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC53A6NM62 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
LRRC53A6NM62 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC53A6NM62 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC53A6NM62 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.9■■□□□ 1.74
LRRC53A6NM62 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC53A6NM62 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC53A6NM62 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC53A6NM62 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LRRC53A6NM62 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
LRRC53A6NM62 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LRRC53A6NM62 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
LRRC53A6NM62 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
LRRC53A6NM62 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
LRRC53A6NM62 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRRC53A6NM62 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.88■■□□□ 1.73
LRRC53A6NM62 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.88■■□□□ 1.73
LRRC53A6NM62 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LRRC53A6NM62 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.88■■□□□ 1.73
LRRC53A6NM62 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
LRRC53A6NM62 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRRC53A6NM62 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRRC53A6NM62 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
LRRC53A6NM62 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LRRC53A6NM62 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LRRC53A6NM62 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LRRC53A6NM62 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LRRC53A6NM62 AL139125.2-201ENST00000623134 1869 ntBASIC25.86■■□□□ 1.73
LRRC53A6NM62 AL157400.5-201ENST00000507624 621 ntBASIC25.86■■□□□ 1.73
LRRC53A6NM62 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.86■■□□□ 1.73
LRRC53A6NM62 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LRRC53A6NM62 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LRRC53A6NM62 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC53A6NM62 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC53A6NM62 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC53A6NM62 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC53A6NM62 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
LRRC53A6NM62 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LRRC53A6NM62 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LRRC53A6NM62 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.84■■□□□ 1.73
LRRC53A6NM62 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LRRC53A6NM62 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LRRC53A6NM62 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LRRC53A6NM62 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LRRC53A6NM62 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LRRC53A6NM62 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LRRC53A6NM62 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.83■■□□□ 1.72
LRRC53A6NM62 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC53A6NM62 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC53A6NM62 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC53A6NM62 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC53A6NM62 AC097639.1-201ENST00000565519 1891 ntBASIC25.82■■□□□ 1.72
LRRC53A6NM62 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC53A6NM62 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LRRC53A6NM62 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
LRRC53A6NM62 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LRRC53A6NM62 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.81■■□□□ 1.72
LRRC53A6NM62 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.81■■□□□ 1.72
LRRC53A6NM62 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LRRC53A6NM62 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
LRRC53A6NM62 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
LRRC53A6NM62 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LRRC53A6NM62 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LRRC53A6NM62 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LRRC53A6NM62 AC060814.1-201ENST00000554326 538 ntBASIC25.8■■□□□ 1.72
LRRC53A6NM62 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LRRC53A6NM62 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
LRRC53A6NM62 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LRRC53A6NM62 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
LRRC53A6NM62 AC025884.2-201ENST00000553429 711 ntBASIC25.78■■□□□ 1.72
LRRC53A6NM62 MIR7108-201ENST00000614319 87 ntBASIC25.78■■□□□ 1.72
LRRC53A6NM62 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LRRC53A6NM62 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LRRC53A6NM62 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LRRC53A6NM62 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.78■■□□□ 1.72
LRRC53A6NM62 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRRC53A6NM62 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.77■■□□□ 1.72
LRRC53A6NM62 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRRC53A6NM62 SLC6A10P-202ENST00000431994 2058 ntBASIC25.77■■□□□ 1.72
LRRC53A6NM62 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRRC53A6NM62 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LRRC53A6NM62 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRRC53A6NM62 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRRC53A6NM62 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms