Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHISA3A0PJX4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.02■□□□□ 0.96
SHISA3A0PJX4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHISA3A0PJX4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.02■□□□□ 0.96
SHISA3A0PJX4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.02■□□□□ 0.96
SHISA3A0PJX4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SHISA3A0PJX4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHISA3A0PJX4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SHISA3A0PJX4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHISA3A0PJX4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHISA3A0PJX4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHISA3A0PJX4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHISA3A0PJX4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHISA3A0PJX4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21■□□□□ 0.95
SHISA3A0PJX4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHISA3A0PJX4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
SHISA3A0PJX4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21■□□□□ 0.95
SHISA3A0PJX4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21■□□□□ 0.95
SHISA3A0PJX4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21■□□□□ 0.95
SHISA3A0PJX4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHISA3A0PJX4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21■□□□□ 0.95
SHISA3A0PJX4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21■□□□□ 0.95
SHISA3A0PJX4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
SHISA3A0PJX4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21■□□□□ 0.95
SHISA3A0PJX4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHISA3A0PJX4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SHISA3A0PJX4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.98■□□□□ 0.95
SHISA3A0PJX4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHISA3A0PJX4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHISA3A0PJX4 AP003733.4-201ENST00000623785 1697 ntBASIC20.98■□□□□ 0.95
SHISA3A0PJX4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.98■□□□□ 0.95
SHISA3A0PJX4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SHISA3A0PJX4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHISA3A0PJX4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHISA3A0PJX4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHISA3A0PJX4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHISA3A0PJX4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHISA3A0PJX4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.95■□□□□ 0.94
SHISA3A0PJX4 LINC00543-201ENST00000567234 1845 ntBASIC20.95■□□□□ 0.94
SHISA3A0PJX4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA3A0PJX4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA3A0PJX4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA3A0PJX4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA3A0PJX4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA3A0PJX4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHISA3A0PJX4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHISA3A0PJX4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SHISA3A0PJX4 SLC6A10P-202ENST00000431994 2058 ntBASIC20.94■□□□□ 0.94
SHISA3A0PJX4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHISA3A0PJX4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHISA3A0PJX4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHISA3A0PJX4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SHISA3A0PJX4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SHISA3A0PJX4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHISA3A0PJX4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms