Protein–RNA interactions for Protein: A0A0C4DH26

IGKV6D-41, Immunoglobulin kappa variable 6D-41 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV6D-41A0A0C4DH26 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.25■■■□□ 2.11
IGKV6D-41A0A0C4DH26 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
IGKV6D-41A0A0C4DH26 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
IGKV6D-41A0A0C4DH26 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
IGKV6D-41A0A0C4DH26 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
IGKV6D-41A0A0C4DH26 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.23■■■□□ 2.11
IGKV6D-41A0A0C4DH26 AL451085.2-201ENST00000605085 799 ntBASIC28.23■■■□□ 2.11
IGKV6D-41A0A0C4DH26 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
IGKV6D-41A0A0C4DH26 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
IGKV6D-41A0A0C4DH26 KRT18P10-201ENST00000388836 1287 ntBASIC28.22■■■□□ 2.11
IGKV6D-41A0A0C4DH26 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
IGKV6D-41A0A0C4DH26 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.22■■■□□ 2.11
IGKV6D-41A0A0C4DH26 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
IGKV6D-41A0A0C4DH26 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
IGKV6D-41A0A0C4DH26 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.21■■■□□ 2.11
IGKV6D-41A0A0C4DH26 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
IGKV6D-41A0A0C4DH26 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
IGKV6D-41A0A0C4DH26 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
IGKV6D-41A0A0C4DH26 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.2■■■□□ 2.1
IGKV6D-41A0A0C4DH26 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
IGKV6D-41A0A0C4DH26 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
IGKV6D-41A0A0C4DH26 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
IGKV6D-41A0A0C4DH26 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
IGKV6D-41A0A0C4DH26 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
IGKV6D-41A0A0C4DH26 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
IGKV6D-41A0A0C4DH26 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC28.18■■■□□ 2.1
IGKV6D-41A0A0C4DH26 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
IGKV6D-41A0A0C4DH26 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.18■■■□□ 2.1
IGKV6D-41A0A0C4DH26 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.18■■■□□ 2.1
IGKV6D-41A0A0C4DH26 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
IGKV6D-41A0A0C4DH26 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
IGKV6D-41A0A0C4DH26 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
IGKV6D-41A0A0C4DH26 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.17■■■□□ 2.1
IGKV6D-41A0A0C4DH26 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.17■■■□□ 2.1
IGKV6D-41A0A0C4DH26 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
IGKV6D-41A0A0C4DH26 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
IGKV6D-41A0A0C4DH26 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.16■■■□□ 2.1
IGKV6D-41A0A0C4DH26 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.16■■■□□ 2.1
IGKV6D-41A0A0C4DH26 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
IGKV6D-41A0A0C4DH26 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
IGKV6D-41A0A0C4DH26 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
IGKV6D-41A0A0C4DH26 YBX1P4-201ENST00000392794 808 ntBASIC28.15■■■□□ 2.1
IGKV6D-41A0A0C4DH26 AC103724.3-201ENST00000564481 992 ntBASIC28.15■■■□□ 2.1
IGKV6D-41A0A0C4DH26 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
IGKV6D-41A0A0C4DH26 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
IGKV6D-41A0A0C4DH26 AL121749.1-202ENST00000609313 2153 ntBASIC28.14■■■□□ 2.1
IGKV6D-41A0A0C4DH26 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
IGKV6D-41A0A0C4DH26 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.14■■■□□ 2.1
IGKV6D-41A0A0C4DH26 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
IGKV6D-41A0A0C4DH26 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
IGKV6D-41A0A0C4DH26 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
IGKV6D-41A0A0C4DH26 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
IGKV6D-41A0A0C4DH26 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
IGKV6D-41A0A0C4DH26 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
IGKV6D-41A0A0C4DH26 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.12■■■□□ 2.09
IGKV6D-41A0A0C4DH26 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
IGKV6D-41A0A0C4DH26 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.12■■■□□ 2.09
IGKV6D-41A0A0C4DH26 AL035685.1-201ENST00000636663 812 ntBASIC28.12■■■□□ 2.09
IGKV6D-41A0A0C4DH26 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
IGKV6D-41A0A0C4DH26 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
IGKV6D-41A0A0C4DH26 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
IGKV6D-41A0A0C4DH26 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.1■■■□□ 2.09
IGKV6D-41A0A0C4DH26 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
IGKV6D-41A0A0C4DH26 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
IGKV6D-41A0A0C4DH26 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
IGKV6D-41A0A0C4DH26 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
IGKV6D-41A0A0C4DH26 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.09■■■□□ 2.09
IGKV6D-41A0A0C4DH26 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
IGKV6D-41A0A0C4DH26 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
IGKV6D-41A0A0C4DH26 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
IGKV6D-41A0A0C4DH26 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
IGKV6D-41A0A0C4DH26 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
IGKV6D-41A0A0C4DH26 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
IGKV6D-41A0A0C4DH26 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
IGKV6D-41A0A0C4DH26 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
IGKV6D-41A0A0C4DH26 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.08■■■□□ 2.09
IGKV6D-41A0A0C4DH26 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms