Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-2A0A0B4J235 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-2A0A0B4J235 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV13-2A0A0B4J235 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TRAV13-2A0A0B4J235 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV13-2A0A0B4J235 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV13-2A0A0B4J235 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV13-2A0A0B4J235 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-2A0A0B4J235 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TRAV13-2A0A0B4J235 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-2A0A0B4J235 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAV13-2A0A0B4J235 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV13-2A0A0B4J235 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV13-2A0A0B4J235 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV13-2A0A0B4J235 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 EED-207ENST00000528180 1745 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 AC097639.1-201ENST00000565519 1891 ntBASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV13-2A0A0B4J235 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 DENR-202ENST00000455982 1052 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 LINC01124-201ENST00000409786 2117 ntBASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TRAV13-2A0A0B4J235 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV13-2A0A0B4J235 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV13-2A0A0B4J235 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-2A0A0B4J235 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV13-2A0A0B4J235 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-2A0A0B4J235 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV13-2A0A0B4J235 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-2A0A0B4J235 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV13-2A0A0B4J235 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 AP003733.4-201ENST00000623785 1697 ntBASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV13-2A0A0B4J235 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV13-2A0A0B4J235 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV13-2A0A0B4J235 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV13-2A0A0B4J235 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 WHAMMP2-203ENST00000563942 1603 ntBASIC15.76■□□□□ 0.11
TRAV13-2A0A0B4J235 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV13-2A0A0B4J235 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-2A0A0B4J235 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV13-2A0A0B4J235 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV13-2A0A0B4J235 AP002365.1-201ENST00000603448 772 ntBASIC15.74■□□□□ 0.11
TRAV13-2A0A0B4J235 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV13-2A0A0B4J235 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms