Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV7-1A0A0A6YYK4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV7-1A0A0A6YYK4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV7-1A0A0A6YYK4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRBV7-1A0A0A6YYK4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV7-1A0A0A6YYK4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV7-1A0A0A6YYK4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV7-1A0A0A6YYK4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV7-1A0A0A6YYK4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV7-1A0A0A6YYK4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-1A0A0A6YYK4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV7-1A0A0A6YYK4 AC096887.2-201ENST00000623443 1957 ntBASIC18.64■□□□□ 0.58
TRBV7-1A0A0A6YYK4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV7-1A0A0A6YYK4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV7-1A0A0A6YYK4 HSD17B1P1-201ENST00000590052 955 ntBASIC18.64■□□□□ 0.57
TRBV7-1A0A0A6YYK4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV7-1A0A0A6YYK4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 KRT18P10-201ENST00000388836 1287 ntBASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 AC026202.3-201ENST00000600805 1127 ntBASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 RAP2CP1-202ENST00000605179 643 ntBASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV7-1A0A0A6YYK4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV7-1A0A0A6YYK4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRBV7-1A0A0A6YYK4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TRBV7-1A0A0A6YYK4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV7-1A0A0A6YYK4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV7-1A0A0A6YYK4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TRBV7-1A0A0A6YYK4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV7-1A0A0A6YYK4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV7-1A0A0A6YYK4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV7-1A0A0A6YYK4 RARRES2P2-201ENST00000394842 485 ntBASIC18.61■□□□□ 0.57
TRBV7-1A0A0A6YYK4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRBV7-1A0A0A6YYK4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRBV7-1A0A0A6YYK4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV7-1A0A0A6YYK4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TRBV7-1A0A0A6YYK4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV7-1A0A0A6YYK4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 AC133552.2-201ENST00000619106 1032 ntBASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV7-1A0A0A6YYK4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV7-1A0A0A6YYK4 AC097639.1-201ENST00000565519 1891 ntBASIC18.58■□□□□ 0.57
TRBV7-1A0A0A6YYK4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRBV7-1A0A0A6YYK4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV7-1A0A0A6YYK4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV7-1A0A0A6YYK4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV7-1A0A0A6YYK4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV7-1A0A0A6YYK4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV7-1A0A0A6YYK4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV7-1A0A0A6YYK4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 AC009831.1-201ENST00000580420 1582 ntBASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV7-1A0A0A6YYK4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV7-1A0A0A6YYK4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV7-1A0A0A6YYK4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV7-1A0A0A6YYK4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV7-1A0A0A6YYK4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
TRBV7-1A0A0A6YYK4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 AC020928.2-201ENST00000588717 2197 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms