Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 AC103564.2-201ENST00000432853 1299 ntBASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 AC109462.3-201ENST00000573934 613 ntBASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGB4Q9UN71 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB4Q9UN71 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 AC007967.3-201ENST00000434308 558 ntBASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB4Q9UN71 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB4Q9UN71 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms