Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH20Q9HBT6 AP002414.3-201ENST00000589352 1468 ntBASIC14.88□□□□□ -0.03
CDH20Q9HBT6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH20Q9HBT6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDH20Q9HBT6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDH20Q9HBT6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 LINC02012-201ENST00000608206 1725 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 AP002414.1-201ENST00000391405 1147 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 SLC25A1P3-201ENST00000395415 828 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 KRT18P27-201ENST00000427733 1299 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 FDX1P1-201ENST00000449115 551 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 RPS15P9-201ENST00000494093 319 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 AC012640.2-201ENST00000561606 901 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 AL049840.3-201ENST00000602669 611 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 AL805961.1-202ENST00000641562 540 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 HLA-A-201ENST00000376802 1334 ntBASIC14.87□□□□□ -0.03
CDH20Q9HBT6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH20Q9HBT6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 PI4KAP1-204ENST00000612579 1703 ntBASIC14.86□□□□□ -0.03
CDH20Q9HBT6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 PTCHD3P3-201ENST00000403073 906 ntBASIC14.86□□□□□ -0.03
CDH20Q9HBT6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.86□□□□□ -0.03
CDH20Q9HBT6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH20Q9HBT6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms