Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGREF1Q99674 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.18■□□□□ 0.18
CGREF1Q99674 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGREF1Q99674 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CGREF1Q99674 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
CGREF1Q99674 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CGREF1Q99674 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.17■□□□□ 0.18
CGREF1Q99674 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.17■□□□□ 0.18
CGREF1Q99674 AC246785.2-201ENST00000432512 513 ntBASIC16.17■□□□□ 0.18
CGREF1Q99674 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.17■□□□□ 0.18
CGREF1Q99674 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.17■□□□□ 0.18
CGREF1Q99674 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.17■□□□□ 0.18
CGREF1Q99674 AC023824.1-201ENST00000562945 2975 ntBASIC16.17■□□□□ 0.18
CGREF1Q99674 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.17■□□□□ 0.18
CGREF1Q99674 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CGREF1Q99674 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGREF1Q99674 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CGREF1Q99674 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CGREF1Q99674 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CGREF1Q99674 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.16■□□□□ 0.18
CGREF1Q99674 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.16■□□□□ 0.18
CGREF1Q99674 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.16■□□□□ 0.18
CGREF1Q99674 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.16■□□□□ 0.18
CGREF1Q99674 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.16■□□□□ 0.18
CGREF1Q99674 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.16■□□□□ 0.18
CGREF1Q99674 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.16■□□□□ 0.18
CGREF1Q99674 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.16■□□□□ 0.18
CGREF1Q99674 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 AC011467.2-201ENST00000598425 242 ntBASIC16.16■□□□□ 0.18
CGREF1Q99674 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.16■□□□□ 0.18
CGREF1Q99674 AC073592.5-201ENST00000624854 528 ntBASIC16.16■□□□□ 0.18
CGREF1Q99674 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.16■□□□□ 0.18
CGREF1Q99674 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CGREF1Q99674 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.16■□□□□ 0.18
CGREF1Q99674 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CGREF1Q99674 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CGREF1Q99674 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.15■□□□□ 0.18
CGREF1Q99674 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.15■□□□□ 0.18
CGREF1Q99674 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGREF1Q99674 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CGREF1Q99674 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms