Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 AC009533.2-201ENST00000543664 586 ntBASIC16.56■□□□□ 0.24
PRPF18Q99633 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.56■□□□□ 0.24
PRPF18Q99633 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.56■□□□□ 0.24
PRPF18Q99633 AL138831.2-201ENST00000606564 490 ntBASIC16.56■□□□□ 0.24
PRPF18Q99633 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.56■□□□□ 0.24
PRPF18Q99633 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRPF18Q99633 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.56■□□□□ 0.24
PRPF18Q99633 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRPF18Q99633 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRPF18Q99633 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.56■□□□□ 0.24
PRPF18Q99633 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PRPF18Q99633 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.55■□□□□ 0.24
PRPF18Q99633 AL136379.1-201ENST00000623471 2642 ntBASIC16.55■□□□□ 0.24
PRPF18Q99633 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 AC005915.1-201ENST00000624912 2018 ntBASIC16.55■□□□□ 0.24
PRPF18Q99633 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.55■□□□□ 0.24
PRPF18Q99633 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.55■□□□□ 0.24
PRPF18Q99633 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.55■□□□□ 0.24
PRPF18Q99633 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 TMPOP1-202ENST00000424642 1267 ntBASIC16.55■□□□□ 0.24
PRPF18Q99633 AC246785.2-201ENST00000432512 513 ntBASIC16.55■□□□□ 0.24
PRPF18Q99633 RN7SL850P-201ENST00000579959 291 ntBASIC16.55■□□□□ 0.24
PRPF18Q99633 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PRPF18Q99633 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 AC105917.1-201ENST00000506637 2539 ntBASIC16.55■□□□□ 0.24
PRPF18Q99633 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PRPF18Q99633 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRPF18Q99633 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.54■□□□□ 0.24
PRPF18Q99633 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.54■□□□□ 0.24
PRPF18Q99633 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.54■□□□□ 0.24
PRPF18Q99633 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.54■□□□□ 0.24
PRPF18Q99633 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.54■□□□□ 0.24
PRPF18Q99633 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.54■□□□□ 0.24
PRPF18Q99633 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.54■□□□□ 0.24
PRPF18Q99633 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.54■□□□□ 0.24
PRPF18Q99633 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.54■□□□□ 0.24
PRPF18Q99633 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.54■□□□□ 0.24
PRPF18Q99633 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PRPF18Q99633 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PRPF18Q99633 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.54■□□□□ 0.24
PRPF18Q99633 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PRPF18Q99633 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
PRPF18Q99633 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRPF18Q99633 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRPF18Q99633 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRPF18Q99633 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.53■□□□□ 0.24
PRPF18Q99633 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.53■□□□□ 0.24
PRPF18Q99633 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms