Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF2Q99496 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RNF2Q99496 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.58□□□□□ -0.23
RNF2Q99496 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF2Q99496 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF2Q99496 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.58□□□□□ -0.23
RNF2Q99496 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF2Q99496 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RNF2Q99496 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF2Q99496 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF2Q99496 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF2Q99496 GUSBP12-201ENST00000513727 720 ntBASIC13.58□□□□□ -0.24
RNF2Q99496 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF2Q99496 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.58□□□□□ -0.24
RNF2Q99496 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 LINC02199-201ENST00000506655 2702 ntBASIC13.58□□□□□ -0.24
RNF2Q99496 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RNF2Q99496 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF2Q99496 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
RNF2Q99496 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF2Q99496 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RNF2Q99496 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF2Q99496 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF2Q99496 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RNF2Q99496 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RNF2Q99496 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF2Q99496 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 MTCL1P1-201ENST00000446207 792 ntBASIC13.57□□□□□ -0.24
RNF2Q99496 AC068472.1-201ENST00000474589 881 ntBASIC13.57□□□□□ -0.24
RNF2Q99496 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 KRT8P26-201ENST00000534154 1276 ntBASIC13.57□□□□□ -0.24
RNF2Q99496 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.57□□□□□ -0.24
RNF2Q99496 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.57□□□□□ -0.24
RNF2Q99496 IGHV3-41-201ENST00000613121 348 ntBASIC13.57□□□□□ -0.24
RNF2Q99496 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF2Q99496 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RNF2Q99496 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 IER3-202ENST00000376377 1350 ntBASIC13.57□□□□□ -0.24
RNF2Q99496 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RNF2Q99496 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RNF2Q99496 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF2Q99496 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms