Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 SART3-203ENST00000546611 1184 ntBASIC16.12■□□□□ 0.17
BBS4Q96RK4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 AC139887.3-201ENST00000568585 713 ntBASIC16.12■□□□□ 0.17
BBS4Q96RK4 MTDHP4-201ENST00000600287 670 ntBASIC16.12■□□□□ 0.17
BBS4Q96RK4 AL353135.1-201ENST00000606729 504 ntBASIC16.12■□□□□ 0.17
BBS4Q96RK4 AL589182.2-201ENST00000619332 1049 ntBASIC16.12■□□□□ 0.17
BBS4Q96RK4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BBS4Q96RK4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
BBS4Q96RK4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 IFNL4P1-201ENST00000607083 540 ntBASIC16.11■□□□□ 0.17
BBS4Q96RK4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.11■□□□□ 0.17
BBS4Q96RK4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 TUBB7P-202ENST00000428444 1305 ntBASIC16.11■□□□□ 0.17
BBS4Q96RK4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.11■□□□□ 0.17
BBS4Q96RK4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BBS4Q96RK4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
BBS4Q96RK4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.1■□□□□ 0.17
BBS4Q96RK4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 AL590787.1-201ENST00000568856 1315 ntBASIC16.1■□□□□ 0.17
BBS4Q96RK4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BBS4Q96RK4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.1■□□□□ 0.17
BBS4Q96RK4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms