Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 CXCL1P1-201ENST00000502804 216 ntBASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 AC004877.2-201ENST00000623941 599 ntBASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NKX2-3Q8TAU0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 AL671710.1-201ENST00000610245 2349 ntBASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 AC096734.2-201ENST00000562054 433 ntBASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-3Q8TAU0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 AC025580.3-201ENST00000617932 1424 ntBASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 AJ011932.1-201ENST00000621707 465 ntBASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 Z92544.3-201ENST00000624747 417 ntBASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.97■□□□□ 0.79
NKX2-3Q8TAU0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 AC069262.1-201ENST00000539058 672 ntBASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 KRT19P2-202ENST00000557173 1012 ntBASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 MIR4492-201ENST00000581627 80 ntBASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 AC005498.2-205ENST00000593218 784 ntBASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.96■□□□□ 0.79
NKX2-3Q8TAU0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms