Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 USP32P1-208ENST00000506594 1164 ntBASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 AC055876.2-201ENST00000531834 546 ntBASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 CTBP2P3-201ENST00000585629 1255 ntBASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC168Q8NDH2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 HLA-H-201ENST00000383620 1096 ntBASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 BTNL10-201ENST00000595971 695 ntBASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 AC073592.3-201ENST00000625118 1834 ntBASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 RN7SL219P-201ENST00000582872 296 ntBASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 AL031055.1-201ENST00000606362 631 ntBASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 AC004790.1-201ENST00000612686 536 ntBASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCDC168Q8NDH2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC168Q8NDH2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms