Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AC022188.1-201ENST00000620960 1664 ntBASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 LINC02199-201ENST00000506655 2702 ntBASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 CHCHD2P8-201ENST00000429873 447 ntBASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AC090616.6-201ENST00000582640 721 ntBASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AC009154.2-201ENST00000621177 724 ntBASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 AC112698.1-201ENST00000510299 916 ntBASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 MIR3652-201ENST00000579335 131 ntBASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 KRT18P1-202ENST00000452408 1331 ntBASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DEPDC4Q8N2C3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms