Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.14■□□□□ 0.33
PACS2Q86VP3 AC139887.4-201ENST00000607877 719 ntBASIC17.14■□□□□ 0.33
PACS2Q86VP3 AC010331.1-201ENST00000611423 582 ntBASIC17.14■□□□□ 0.33
PACS2Q86VP3 AL590326.2-201ENST00000625139 305 ntBASIC17.14■□□□□ 0.33
PACS2Q86VP3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.14■□□□□ 0.33
PACS2Q86VP3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PACS2Q86VP3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PACS2Q86VP3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PACS2Q86VP3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.14■□□□□ 0.33
PACS2Q86VP3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PACS2Q86VP3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PACS2Q86VP3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.14■□□□□ 0.33
PACS2Q86VP3 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.14■□□□□ 0.33
PACS2Q86VP3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PACS2Q86VP3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PACS2Q86VP3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PACS2Q86VP3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.13■□□□□ 0.33
PACS2Q86VP3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 RNF152P1-201ENST00000397754 604 ntBASIC17.13■□□□□ 0.33
PACS2Q86VP3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 AC009947.2-201ENST00000444014 672 ntBASIC17.13■□□□□ 0.33
PACS2Q86VP3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PACS2Q86VP3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.13■□□□□ 0.33
PACS2Q86VP3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 DUX4L26-201ENST00000489078 1255 ntBASIC17.12■□□□□ 0.33
PACS2Q86VP3 YBX1P2-201ENST00000489612 999 ntBASIC17.12■□□□□ 0.33
PACS2Q86VP3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 AC006011.2-201ENST00000621313 1158 ntBASIC17.12■□□□□ 0.33
PACS2Q86VP3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PACS2Q86VP3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.12■□□□□ 0.33
PACS2Q86VP3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms