Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 RN7SL589P-201ENST00000481268 310 ntBASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 AC243562.1-201ENST00000560672 389 ntBASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.06■□□□□ 0.48
DCLRE1AQ6PJP8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 RNU1-129P-201ENST00000384064 167 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 PMS2P4-201ENST00000412466 1052 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AL592309.1-201ENST00000443127 649 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AC023141.5-201ENST00000458585 616 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AC079140.1-201ENST00000508039 487 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AC124947.2-201ENST00000547118 1133 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AC004449.1-201ENST00000564240 433 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 U1.21-201ENST00000580816 167 ntBASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DCLRE1AQ6PJP8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AC005237.2-201ENST00000434368 219 ntBASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AC093520.2-201ENST00000561830 333 ntBASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AL135744.1-201ENST00000565098 629 ntBASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 MIR3909-201ENST00000579518 119 ntBASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AC093028.1-201ENST00000622998 982 ntBASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.04■□□□□ 0.48
DCLRE1AQ6PJP8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 PP12613-201ENST00000424958 2230 ntBASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms