Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 MRPL20P1-201ENST00000400819 433 ntBASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 AC009947.1-201ENST00000444350 727 ntBASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 AC108751.1-201ENST00000490852 363 ntBASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 RNA5SP415-201ENST00000517246 115 ntBASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 AP002490.2-201ENST00000524791 560 ntBASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN20Q4JDL3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.83■□□□□ 0.45
PTPN20Q4JDL3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 SLC22A20-204ENST00000530038 1673 ntBASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 AC006277.1-201ENST00000624348 1610 ntBASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 UBALD1-205ENST00000590891 2641 ntBASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN20Q4JDL3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 MPDU1-223ENST00000582151 728 ntBASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 AC013467.2-201ENST00000605472 835 ntBASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 HLA-A-202ENST00000376806 1854 ntBASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN20Q4JDL3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms