Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
EMP3P54852 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EMP3P54852 LAGE3P1-201ENST00000425356 484 ntBASIC16.6■□□□□ 0.25
EMP3P54852 AC093909.1-201ENST00000504731 1122 ntBASIC16.6■□□□□ 0.25
EMP3P54852 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.6■□□□□ 0.25
EMP3P54852 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
EMP3P54852 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.6■□□□□ 0.25
EMP3P54852 AC107918.4-202ENST00000641623 219 ntBASIC16.6■□□□□ 0.25
EMP3P54852 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EMP3P54852 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EMP3P54852 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EMP3P54852 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
EMP3P54852 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EMP3P54852 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EMP3P54852 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.6■□□□□ 0.25
EMP3P54852 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.6■□□□□ 0.25
EMP3P54852 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EMP3P54852 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EMP3P54852 HLA-J-201ENST00000462773 1622 ntBASIC16.59■□□□□ 0.25
EMP3P54852 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.59■□□□□ 0.25
EMP3P54852 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EMP3P54852 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 LINC00304-203ENST00000565008 1864 ntBASIC16.59■□□□□ 0.25
EMP3P54852 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.59■□□□□ 0.25
EMP3P54852 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
EMP3P54852 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.59■□□□□ 0.25
EMP3P54852 OR7E14P-202ENST00000530490 1290 ntBASIC16.59■□□□□ 0.25
EMP3P54852 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.59■□□□□ 0.25
EMP3P54852 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.59■□□□□ 0.25
EMP3P54852 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.59■□□□□ 0.25
EMP3P54852 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EMP3P54852 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
EMP3P54852 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
EMP3P54852 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EMP3P54852 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
EMP3P54852 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.59■□□□□ 0.25
EMP3P54852 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.59■□□□□ 0.25
EMP3P54852 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EMP3P54852 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
EMP3P54852 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
EMP3P54852 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EMP3P54852 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EMP3P54852 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
EMP3P54852 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
EMP3P54852 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.58■□□□□ 0.24
EMP3P54852 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.58■□□□□ 0.24
EMP3P54852 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.58■□□□□ 0.24
EMP3P54852 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
EMP3P54852 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
EMP3P54852 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.58■□□□□ 0.24
EMP3P54852 AL137246.1-201ENST00000607072 977 ntBASIC16.58■□□□□ 0.24
EMP3P54852 AC083964.1-201ENST00000607549 630 ntBASIC16.58■□□□□ 0.24
EMP3P54852 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.58■□□□□ 0.24
EMP3P54852 AL139327.4-201ENST00000612362 153 ntBASIC16.58■□□□□ 0.24
EMP3P54852 FAM215A-202ENST00000632077 792 ntBASIC16.58■□□□□ 0.24
EMP3P54852 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.58■□□□□ 0.24
EMP3P54852 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.58■□□□□ 0.24
EMP3P54852 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 AC133963.1-201ENST00000504166 1679 ntBASIC16.58■□□□□ 0.24
EMP3P54852 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
EMP3P54852 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.58■□□□□ 0.24
EMP3P54852 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.58■□□□□ 0.24
EMP3P54852 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.58■□□□□ 0.24
EMP3P54852 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
EMP3P54852 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EMP3P54852 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.58■□□□□ 0.24
EMP3P54852 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EMP3P54852 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.57■□□□□ 0.24
EMP3P54852 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EMP3P54852 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms