Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATP1B3P54709 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.79□□□□□ -0.04
ATP1B3P54709 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.79□□□□□ -0.04
ATP1B3P54709 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.79□□□□□ -0.04
ATP1B3P54709 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.79□□□□□ -0.04
ATP1B3P54709 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 AC091607.1-201ENST00000490318 1060 ntBASIC14.79□□□□□ -0.04
ATP1B3P54709 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.79□□□□□ -0.04
ATP1B3P54709 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.79□□□□□ -0.04
ATP1B3P54709 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.79□□□□□ -0.04
ATP1B3P54709 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.79□□□□□ -0.04
ATP1B3P54709 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.79□□□□□ -0.04
ATP1B3P54709 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.79□□□□□ -0.04
ATP1B3P54709 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATP1B3P54709 AL135999.2-201ENST00000622438 1686 ntBASIC14.79□□□□□ -0.04
ATP1B3P54709 AD001527.2-201ENST00000622994 785 ntBASIC14.79□□□□□ -0.04
ATP1B3P54709 AC116407.4-201ENST00000623319 1061 ntBASIC14.79□□□□□ -0.04
ATP1B3P54709 AC073592.5-201ENST00000624854 528 ntBASIC14.79□□□□□ -0.04
ATP1B3P54709 AC005915.1-201ENST00000624912 2018 ntBASIC14.79□□□□□ -0.04
ATP1B3P54709 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
ATP1B3P54709 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ATP1B3P54709 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATP1B3P54709 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ATP1B3P54709 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.78□□□□□ -0.04
ATP1B3P54709 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
ATP1B3P54709 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.78□□□□□ -0.04
ATP1B3P54709 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ATP1B3P54709 PCED1CP-201ENST00000419887 785 ntBASIC14.78□□□□□ -0.04
ATP1B3P54709 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.78□□□□□ -0.04
ATP1B3P54709 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.78□□□□□ -0.04
ATP1B3P54709 DRAXINP1-201ENST00000437611 948 ntBASIC14.78□□□□□ -0.04
ATP1B3P54709 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.78□□□□□ -0.04
ATP1B3P54709 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.78□□□□□ -0.04
ATP1B3P54709 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.78□□□□□ -0.04
ATP1B3P54709 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.78□□□□□ -0.04
ATP1B3P54709 AC087388.1-201ENST00000571370 1112 ntBASIC14.78□□□□□ -0.04
ATP1B3P54709 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.78□□□□□ -0.04
ATP1B3P54709 AL590326.2-201ENST00000625139 305 ntBASIC14.78□□□□□ -0.04
ATP1B3P54709 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 AC026691.1-201ENST00000602502 2017 ntBASIC14.78□□□□□ -0.04
ATP1B3P54709 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ATP1B3P54709 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.78□□□□□ -0.04
ATP1B3P54709 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATP1B3P54709 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.77□□□□□ -0.04
ATP1B3P54709 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ATP1B3P54709 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.77□□□□□ -0.04
ATP1B3P54709 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 AC079328.2-201ENST00000561241 3354 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms