Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
PCP4P48539 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 CCT7P1-201ENST00000406551 1611 ntBASIC11.51□□□□□ -0.57
PCP4P48539 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.51□□□□□ -0.57
PCP4P48539 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.51□□□□□ -0.57
PCP4P48539 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.51□□□□□ -0.57
PCP4P48539 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.51□□□□□ -0.57
PCP4P48539 IRX1P1-201ENST00000438849 1838 ntBASIC11.51□□□□□ -0.57
PCP4P48539 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PCP4P48539 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PCP4P48539 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
PCP4P48539 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.5□□□□□ -0.57
PCP4P48539 CD37-204ENST00000535669 1674 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 AL096828.2-201ENST00000567259 1965 ntBASIC11.5□□□□□ -0.57
PCP4P48539 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
PCP4P48539 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PCP4P48539 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.5□□□□□ -0.57
PCP4P48539 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC11.49□□□□□ -0.57
PCP4P48539 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms