Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CXCL5P42830 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CXCL5P42830 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CXCL5P42830 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 LINC01568-207ENST00000641790 1380 ntBASIC11.51□□□□□ -0.57
CXCL5P42830 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL5P42830 LINC02228-204ENST00000642115 2962 ntBASIC11.51□□□□□ -0.57
CXCL5P42830 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CXCL5P42830 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL5P42830 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL5P42830 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CXCL5P42830 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.51□□□□□ -0.57
CXCL5P42830 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL5P42830 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL5P42830 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
CXCL5P42830 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL5P42830 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CXCL5P42830 LIN28AP1-201ENST00000429574 405 ntBASIC11.5□□□□□ -0.57
CXCL5P42830 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL5P42830 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 AC122714.2-201ENST00000502787 707 ntBASIC11.5□□□□□ -0.57
CXCL5P42830 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.5□□□□□ -0.57
CXCL5P42830 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 TUBB8P12-201ENST00000308911 1335 ntBASIC11.5□□□□□ -0.57
CXCL5P42830 TUBB7P-202ENST00000428444 1305 ntBASIC11.5□□□□□ -0.57
CXCL5P42830 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TUBB8P7-204ENST00000567960 1332 ntBASIC11.5□□□□□ -0.57
CXCL5P42830 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.5□□□□□ -0.57
CXCL5P42830 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CXCL5P42830 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CXCL5P42830 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CXCL5P42830 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CXCL5P42830 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.49□□□□□ -0.57
CXCL5P42830 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.49□□□□□ -0.57
CXCL5P42830 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 AC105917.1-201ENST00000506637 2539 ntBASIC11.49□□□□□ -0.57
CXCL5P42830 CYP2T1P-202ENST00000641596 2535 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms