Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PDE6GP18545 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC10.52□□□□□ -0.73
PDE6GP18545 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.52□□□□□ -0.73
PDE6GP18545 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC10.52□□□□□ -0.73
PDE6GP18545 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.52□□□□□ -0.73
PDE6GP18545 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC10.52□□□□□ -0.73
PDE6GP18545 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
PDE6GP18545 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC10.52□□□□□ -0.73
PDE6GP18545 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.52□□□□□ -0.73
PDE6GP18545 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PDE6GP18545 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC10.51□□□□□ -0.73
PDE6GP18545 MIR193BHG-211ENST00000641433 5365 ntBASIC10.51□□□□□ -0.73
PDE6GP18545 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
PDE6GP18545 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 PEG13-201ENST00000631594 5667 ntBASIC10.51□□□□□ -0.73
PDE6GP18545 BUB3-202ENST00000368859 667 ntTSL 3 BASIC10.51□□□□□ -0.73
PDE6GP18545 MYCLP1-201ENST00000372451 1075 ntBASIC10.51□□□□□ -0.73
PDE6GP18545 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 AC002558.1-201ENST00000488906 803 ntBASIC10.51□□□□□ -0.73
PDE6GP18545 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC10.51□□□□□ -0.73
PDE6GP18545 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC10.51□□□□□ -0.73
PDE6GP18545 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC10.51□□□□□ -0.73
PDE6GP18545 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC10.51□□□□□ -0.73
PDE6GP18545 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PDE6GP18545 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.51□□□□□ -0.73
PDE6GP18545 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC10.51□□□□□ -0.73
PDE6GP18545 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.51□□□□□ -0.73
PDE6GP18545 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
PDE6GP18545 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
PDE6GP18545 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 AL603832.2-201ENST00000566195 2125 ntBASIC10.51□□□□□ -0.73
PDE6GP18545 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC10.51□□□□□ -0.73
PDE6GP18545 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
PDE6GP18545 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
PDE6GP18545 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
PDE6GP18545 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PDE6GP18545 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PDE6GP18545 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PDE6GP18545 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
PDE6GP18545 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC10.5□□□□□ -0.73
PDE6GP18545 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC10.5□□□□□ -0.73
PDE6GP18545 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
PDE6GP18545 AL596087.1-201ENST00000400979 1969 ntBASIC10.5□□□□□ -0.73
PDE6GP18545 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PDE6GP18545 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PDE6GP18545 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms